| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605135
Identifier: 86605135
GI number: 86605135
Start: 437251
End: 437646
Strand: Reverse
Name: 86605135
Synonym: CYA_0416
Alternate gene names: NA
Gene position: 437646-437251 (Counterclockwise)
Preceding gene: 86605137
Following gene: 86605134
Centisome position: 14.92
GC content: 60.86
Gene sequence:
>396_bases ATGTCGTTCCCGCCGAGTTGGGCATGGTTTCCGCCTAGCCTGCGGCTAGTTGTCCTGAGGCTCCAGATCCAAGATCTCCT GGATCTCGGCATCGGTATAGCCCACCGCCCGCAGCTTCTCTGCCACCGCCTCGATCTCCTGCGCCGACAGATCGTGCTGG CGTACCCGATCCCAGAGATTGGCCACAATCTGCAGCAGCAAACGGCTGCTTTCCGCCTCGAACAGCTCAAAAGCCGTCGC CATCTCGATTGCCTGCAACACCTCCTCGGCGCTGCCAATCGGCTGATCGAGGGATTGTTCCTCCAGATCCACCAGCAACT GGCGCAGCTGATTCAGGCCCTCCCCAAGAGCAGACATACCCCCGGCTCCTCAACGGCACCTGAGCACTCACCCTAA
Upstream 100 bases:
>100_bases AGCGGCGCCAACCTGAAAGGGGCCAACCTCAGCGGCTGTAAACTCAAGCTTGCCAACCTGCGGGGAGCCTGTTACGACAC GGCCACTCACCTAGAAGCAG
Downstream 100 bases:
>100_bases CAGGCTTGCCTCCCTGGGCAAAAGGGATCCGATGAATTCCGCACCACCTGAGGCTATTCTGAGTAGAGGAACAATTTAGT GGCAAGCGCCAGGATTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSFPPSWAWFPPSLRLVVLRLQIQDLLDLGIGIAHRPQLLCHRLDLLRRQIVLAYPIPEIGHNLQQQTAAFRLEQLKSRR HLDCLQHLLGAANRLIEGLFLQIHQQLAQLIQALPKSRHTPGSSTAPEHSP
Sequences:
>Translated_131_residues MSFPPSWAWFPPSLRLVVLRLQIQDLLDLGIGIAHRPQLLCHRLDLLRRQIVLAYPIPEIGHNLQQQTAAFRLEQLKSRR HLDCLQHLLGAANRLIEGLFLQIHQQLAQLIQALPKSRHTPGSSTAPEHSP >Mature_130_residues SFPPSWAWFPPSLRLVVLRLQIQDLLDLGIGIAHRPQLLCHRLDLLRRQIVLAYPIPEIGHNLQQQTAAFRLEQLKSRRH LDCLQHLLGAANRLIEGLFLQIHQQLAQLIQALPKSRHTPGSSTAPEHSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14930; Mature: 14799
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPPSWAWFPPSLRLVVLRLQIQDLLDLGIGIAHRPQLLCHRLDLLRRQIVLAYPIPEI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH GHNLQQQTAAFRLEQLKSRRHLDCLQHLLGAANRLIEGLFLQIHQQLAQLIQALPKSRHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGSSTAPEHSP CCCCCCCCCCC >Mature Secondary Structure SFPPSWAWFPPSLRLVVLRLQIQDLLDLGIGIAHRPQLLCHRLDLLRRQIVLAYPIPEI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH GHNLQQQTAAFRLEQLKSRRHLDCLQHLLGAANRLIEGLFLQIHQQLAQLIQALPKSRHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGSSTAPEHSP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA