Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605134

Identifier: 86605134

GI number: 86605134

Start: 436363

End: 437094

Strand: Reverse

Name: 86605134

Synonym: CYA_0415

Alternate gene names: NA

Gene position: 437094-436363 (Counterclockwise)

Preceding gene: 86605135

Following gene: 86605133

Centisome position: 14.9

GC content: 58.88

Gene sequence:

>732_bases
ATGGCCCCAGCGAACGTCCTGCCCAACACCCCCCCGTCCCCCACTGATGGGGGCGGCACTGCCCTAGACTACAGCAGCCC
AAGGTATCGGCAGGCCTACTCCCGCATCAACGGTATTGTTATCGAAGGCGAACAAGAAGCCCACGACAACTACCTCAAGC
TGGCCGAAATGCTGCCGGAAGCTGCAGAGGAGCTGCGCAAGCTGGCCAAGATGGAATTGCGCCACATGAAAGGCTTCCAG
GCCTGCGGCAAAAACCTGCAGGTGGAACCCGATGTGGAGTTTGCCCGCGCCTTTTTCGCGCCCTTGCGGGACAATTTCCA
AAGCGCCGCAGCGGCAGGGGATCTGGTCTCCTGTTTTGTCATTCAGTCTTTGATCATCGAGTGCTTTGCCATTGCCGCCT
ACAACATCTACATCCCGGTTGCCGATGACTTTGCCCGCAAGATCACCGAGGGGGTAGTTAAGGACGAGTATCTGCACCTC
AATTTTGGGGAGCGCTGGCTGGGCGAGCACTTTGCCGAGGTTAAAGCCCAGATCGAAGCAGCCAACGCCCAAAATCTGCC
TCTAGTTCGGCAGATGCTGCAGCAGGTAGAGGCGGATGTGGAAGCCATTTACATGGATCGCGAGGCCATTGTAGAAGACT
TCATGATCGCCTACGGCGAGGCCCTGGCCAGCATCGGCTTCAACACCCGCGAGGTAATGCGCCTCTCGGCCCAGGGTCTG
CGGGCCGCCTGA

Upstream 100 bases:

>100_bases
TTCTGAGTAGAGGAACAATTTAGTGGCAAGCGCCAGGATTGTTGAAGGGCCGGCGAAGCGGTTCACAACAATCTACAACT
ACAAAAGGAGATGCACGAGT

Downstream 100 bases:

>100_bases
CGCAACTCAACTCTGCCTGCCGATTGGTTTTCCGGCCTGGCTGGAACGCTCCCTACCCTCTCTGGGTGCGGACATGTTTT
GATGGGATCCGGATGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAPANVLPNTPPSPTDGGGTALDYSSPRYRQAYSRINGIVIEGEQEAHDNYLKLAEMLPEAAEELRKLAKMELRHMKGFQ
ACGKNLQVEPDVEFARAFFAPLRDNFQSAAAAGDLVSCFVIQSLIIECFAIAAYNIYIPVADDFARKITEGVVKDEYLHL
NFGERWLGEHFAEVKAQIEAANAQNLPLVRQMLQQVEADVEAIYMDREAIVEDFMIAYGEALASIGFNTREVMRLSAQGL
RAA

Sequences:

>Translated_243_residues
MAPANVLPNTPPSPTDGGGTALDYSSPRYRQAYSRINGIVIEGEQEAHDNYLKLAEMLPEAAEELRKLAKMELRHMKGFQ
ACGKNLQVEPDVEFARAFFAPLRDNFQSAAAAGDLVSCFVIQSLIIECFAIAAYNIYIPVADDFARKITEGVVKDEYLHL
NFGERWLGEHFAEVKAQIEAANAQNLPLVRQMLQQVEADVEAIYMDREAIVEDFMIAYGEALASIGFNTREVMRLSAQGL
RAA
>Mature_242_residues
APANVLPNTPPSPTDGGGTALDYSSPRYRQAYSRINGIVIEGEQEAHDNYLKLAEMLPEAAEELRKLAKMELRHMKGFQA
CGKNLQVEPDVEFARAFFAPLRDNFQSAAAAGDLVSCFVIQSLIIECFAIAAYNIYIPVADDFARKITEGVVKDEYLHLN
FGERWLGEHFAEVKAQIEAANAQNLPLVRQMLQQVEADVEAIYMDREAIVEDFMIAYGEALASIGFNTREVMRLSAQGLR
AA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26978; Mature: 26847

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPANVLPNTPPSPTDGGGTALDYSSPRYRQAYSRINGIVIEGEQEAHDNYLKLAEMLPE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHH
AAEELRKLAKMELRHMKGFQACGKNLQVEPDVEFARAFFAPLRDNFQSAAAAGDLVSCFV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQSLIIECFAIAAYNIYIPVADDFARKITEGVVKDEYLHLNFGERWLGEHFAEVKAQIEA
HHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH
ANAQNLPLVRQMLQQVEADVEAIYMDREAIVEDFMIAYGEALASIGFNTREVMRLSAQGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
RAA
CCC
>Mature Secondary Structure 
APANVLPNTPPSPTDGGGTALDYSSPRYRQAYSRINGIVIEGEQEAHDNYLKLAEMLPE
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHH
AAEELRKLAKMELRHMKGFQACGKNLQVEPDVEFARAFFAPLRDNFQSAAAAGDLVSCFV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQSLIIECFAIAAYNIYIPVADDFARKITEGVVKDEYLHLNFGERWLGEHFAEVKAQIEA
HHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH
ANAQNLPLVRQMLQQVEADVEAIYMDREAIVEDFMIAYGEALASIGFNTREVMRLSAQGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
RAA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA