| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is treY
Identifier: 86605118
GI number: 86605118
Start: 412991
End: 415792
Strand: Reverse
Name: treY
Synonym: CYA_0399
Alternate gene names: 86605118
Gene position: 415792-412991 (Counterclockwise)
Preceding gene: 86605122
Following gene: 86605116
Centisome position: 14.18
GC content: 51.82
Gene sequence:
>2802_bases ATGCGGATCCCGACTTCCACCTATCGCATTCAGTTTCACGCTGGATTTGACTTCGAGGCAGCGCGGCAAATTGTCCCCTA CCTGAAGTTGCTGGGCATCAGCGATCTATATGCTTCCCCCATCTTTCAGGCCCGCAAGGGCAGCACCCATGGCTACGACG TCGTGGATCCCAGGCAGATCAACGTGGAGTTAGGGGGGAGTGAAAAGTTTGAACTCTTGTGGGAAACCCTCAACCAGCAG GGAATCGGCTGGATCCAAGACATCGTGCCCAACCACATGGCCTACGACGGCCAAAACCAAATGCTGATGGATGTTTTGGA AAGCGGGCCTAACTCAGACTTTATCGACTACTTTGACGTGAATTGGGATCACTCCTATCTGGGGATCAAGGGCAGAATCC TTGCTCCCTTCCTGGGCGACTTCTACAACAAGTGCCTGGAGTCAGGCCAGATTCAGCTACGCTATGATGCCGACGGCCTG AGCATTAACTACTACAACTTAAGATTTCCTCTCAATATTGACACCTATGCCGATGTTTTTACCTATAACCTGGGCAAGTT GCGGCGGAAACTAGGGCGCAGCCACCCCGACTATGTCAAACTACTCGGGATCCTCTTCAGCCTCAAGTTTATTCCTAGCA AAGAGGATCTCCTAGAGCGCACGGATCAAATTAGCTTTGCCAAGCACTCCCTCTGGGAGCTCTACACCTCTAGCCCGCAT ATTCAAAGCTTCTTTGACGAGAACATCGCCATCTTCAACGGCAAGCCCGGGGATCCCTCCAGCTTTGACTTGTTGGACAG CCTTTTGGCACGGCAAAACTTTCGCCTCTCCTTTTGGAAGGTGGGTGCTGAGGAGATTAATTATCGTCGTTTTTTTACCA TCAACGATCTGATCTCGCTGCGGATGGAAGATCGCGAAGTATTTCGCAAAACGCATCAGCTCATTCTCAAGCTCGCAGAA CAGGGGCGCTTCACAGGTTTACGCATCGACCACATCGATGGCCTATTTAACCCAGAGGAGTATCTCCACCGTCTGCGAGA ACGCTGTCCAGATCTCTACATTGTGGTAGAAAAAATACTAGAAGCTAATGAGAAGCTACCTCAGCAATGGCCAGTTCAAG GCACAACGGGTTACGACTTTTTAGCTAAGCTTAATGGCATCTTTTGCCAATCAGAGAATGCAGAAGCCTTCAGTGCTCTT TATCAAGATTTCACCAACCTGCAACAGTCACCAGAACAGGTTATCGAAGATAAAAAACGGCTGATTATCGAGCGCAACCT GGCAGGGGACATGGACAACCTTGCTTTTTTGCTCAAGCAGATTACCAGCCATCACCGCTATGCCAATGACTTCACCCTCT ACAGCTTGCGCCGAGCCTTGGCAGAGGTTTTGGTGTGTTTCCCAGTTTACCGAGTCTACATCCACGAAGGGATCCTCAGC TCAGAAGGTCAACAGGCCGTCCGCCAAGCTGTAGAGAAAGCTAAGGAGAACCTGCCCATTTTGGTTAACGAGCTGAATTT CCTGCAGCGCTTTCTCTGCCTTGAGTTCCCCGAAAACGTCTCAGAGGAAGAGAAAAACGAGCAAATCTACTTTGCCATGC GGCTGCAACAGTTGGCTGGCCCTCTCATGGCCAAAGGGGTAGAGGATACGGCCTTCTACGTTTACAACAGGCTGCTATCC CTGAACGAAGTAGGTGGGGATCTATATCGTTTTGGCATTTCTGTCCAAGAGTTCCATCGCTTTAACCAAGAACGAGCAGC CCAGTGGCCCTTCTCAATGAATGCTTCCTCCACCCATGACACCAAACGCGGCGAGGATGTGCGGGCCCGCCTGAATGTGC TCTCGGAACTCCCCGCTGAATGGGAGAAGCACATTAAACTCTGGCATGAGTTGAATCTTGGCTACAAAGTTCGCAGCAAG CAAGCGAAGCGTTCGGAGCTGCCCGATCGCAACGACGAGTATTTTCTTTATCAGACTTTGATCGGCTCCTATCCTTTTCA ACCAGAGGAAGTTCCTACCTTTATCCAGCGAGTTAAAGACTACGCCATTAAAGCAGTTCGGGAAGCTAAGGTTCATACTG CTTGGCTTCGCCCCGATACCGAATACGAAGAAGCTACCCTTGCTTTCATCGATCAGATCCTGCGGCCCTCAAGCCCCTTC TTGGAGTCTTTCCTGCCCTTTCAGCGCAAAATTGCCCACTTTGGCATCTTTAACTCTCTCTCTCAAACTCTGCTGAAGCT CACCAGCCCTGGGATCCCGGATATCTACCAGGGCACGGAGCTGTGGGATCTCAGCATGGTCGATCCCGACAATCGTCGGC CTGTGGACTTTTCCCGCCGCCTGGCTTACCTCGAAGAAATTCAACGGCGAATCAAGCAGGATCCCCTGCAACTTATCCAA GATCTTCTGCTTCACCGCCACGACGGCCGCATTAAGCTGTTTCTCATCCATCAGGTGCTAAAGGCCCGTCAGGAACAGCC GCAGCTATTTCTGGAAGGCAGTTATATTCCCCTGCAGGTGAGCGGCTCCTATGCCAACCATGTCATTGCTTTTGCCCGTC AGCACGACAAACAAGTCGTCCTGGTGGTGGCGCCCCGCTTCCTAACCTCCCTAATTTACCAGACGCAGGATCCCTTGGGG GACGCTGTTTGGAAAGACACAGAAATTCAGCTGCCGCGCTGGAAGCGGCTGGAGTGGGTCAATGGCCTCACCCAAGAAGG GATCCCTGCCGGCGACACCTTGTCGGTGGGCGCCATCCTCAAGTCTTTTCCCGTGGCTCTACTGTGGGGGCAATCTCGCT GA
Upstream 100 bases:
>100_bases TTGCCGATCTTTATGCGGGACCTCCCGATCTTAGCCGCTACCCTGGAAACATCCCTTCTGGTCATGGGCTGAGCCACCTT GTCGTCGTTTTGAGGTCGTC
Downstream 100 bases:
>100_bases GGAACCTAGGGAGCCGCTGCTGCGGCAGGAGTCAGGGCCTGGAAGTTGACAATGCGGGCAAACTCTTGGGGATCGAGGCT GGCCCCTCCCACCAGTACAC
Product: malto-oligosyltrehalose synthase
Products: NA
Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]
Number of amino acids: Translated: 933; Mature: 933
Protein sequence:
>933_residues MRIPTSTYRIQFHAGFDFEAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINVELGGSEKFELLWETLNQQ GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFIDYFDVNWDHSYLGIKGRILAPFLGDFYNKCLESGQIQLRYDADGL SINYYNLRFPLNIDTYADVFTYNLGKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSPH IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQNFRLSFWKVGAEEINYRRFFTINDLISLRMEDREVFRKTHQLILKLAE QGRFTGLRIDHIDGLFNPEEYLHRLRERCPDLYIVVEKILEANEKLPQQWPVQGTTGYDFLAKLNGIFCQSENAEAFSAL YQDFTNLQQSPEQVIEDKKRLIIERNLAGDMDNLAFLLKQITSHHRYANDFTLYSLRRALAEVLVCFPVYRVYIHEGILS SEGQQAVRQAVEKAKENLPILVNELNFLQRFLCLEFPENVSEEEKNEQIYFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS LNEVGGDLYRFGISVQEFHRFNQERAAQWPFSMNASSTHDTKRGEDVRARLNVLSELPAEWEKHIKLWHELNLGYKVRSK QAKRSELPDRNDEYFLYQTLIGSYPFQPEEVPTFIQRVKDYAIKAVREAKVHTAWLRPDTEYEEATLAFIDQILRPSSPF LESFLPFQRKIAHFGIFNSLSQTLLKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRIKQDPLQLIQ DLLLHRHDGRIKLFLIHQVLKARQEQPQLFLEGSYIPLQVSGSYANHVIAFARQHDKQVVLVVAPRFLTSLIYQTQDPLG DAVWKDTEIQLPRWKRLEWVNGLTQEGIPAGDTLSVGAILKSFPVALLWGQSR
Sequences:
>Translated_933_residues MRIPTSTYRIQFHAGFDFEAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINVELGGSEKFELLWETLNQQ GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFIDYFDVNWDHSYLGIKGRILAPFLGDFYNKCLESGQIQLRYDADGL SINYYNLRFPLNIDTYADVFTYNLGKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSPH IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQNFRLSFWKVGAEEINYRRFFTINDLISLRMEDREVFRKTHQLILKLAE QGRFTGLRIDHIDGLFNPEEYLHRLRERCPDLYIVVEKILEANEKLPQQWPVQGTTGYDFLAKLNGIFCQSENAEAFSAL YQDFTNLQQSPEQVIEDKKRLIIERNLAGDMDNLAFLLKQITSHHRYANDFTLYSLRRALAEVLVCFPVYRVYIHEGILS SEGQQAVRQAVEKAKENLPILVNELNFLQRFLCLEFPENVSEEEKNEQIYFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS LNEVGGDLYRFGISVQEFHRFNQERAAQWPFSMNASSTHDTKRGEDVRARLNVLSELPAEWEKHIKLWHELNLGYKVRSK QAKRSELPDRNDEYFLYQTLIGSYPFQPEEVPTFIQRVKDYAIKAVREAKVHTAWLRPDTEYEEATLAFIDQILRPSSPF LESFLPFQRKIAHFGIFNSLSQTLLKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRIKQDPLQLIQ DLLLHRHDGRIKLFLIHQVLKARQEQPQLFLEGSYIPLQVSGSYANHVIAFARQHDKQVVLVVAPRFLTSLIYQTQDPLG DAVWKDTEIQLPRWKRLEWVNGLTQEGIPAGDTLSVGAILKSFPVALLWGQSR >Mature_933_residues MRIPTSTYRIQFHAGFDFEAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQINVELGGSEKFELLWETLNQQ GIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFIDYFDVNWDHSYLGIKGRILAPFLGDFYNKCLESGQIQLRYDADGL SINYYNLRFPLNIDTYADVFTYNLGKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSPH IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQNFRLSFWKVGAEEINYRRFFTINDLISLRMEDREVFRKTHQLILKLAE QGRFTGLRIDHIDGLFNPEEYLHRLRERCPDLYIVVEKILEANEKLPQQWPVQGTTGYDFLAKLNGIFCQSENAEAFSAL YQDFTNLQQSPEQVIEDKKRLIIERNLAGDMDNLAFLLKQITSHHRYANDFTLYSLRRALAEVLVCFPVYRVYIHEGILS SEGQQAVRQAVEKAKENLPILVNELNFLQRFLCLEFPENVSEEEKNEQIYFAMRLQQLAGPLMAKGVEDTAFYVYNRLLS LNEVGGDLYRFGISVQEFHRFNQERAAQWPFSMNASSTHDTKRGEDVRARLNVLSELPAEWEKHIKLWHELNLGYKVRSK QAKRSELPDRNDEYFLYQTLIGSYPFQPEEVPTFIQRVKDYAIKAVREAKVHTAWLRPDTEYEEATLAFIDQILRPSSPF LESFLPFQRKIAHFGIFNSLSQTLLKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRRLAYLEEIQRRIKQDPLQLIQ DLLLHRHDGRIKLFLIHQVLKARQEQPQLFLEGSYIPLQVSGSYANHVIAFARQHDKQVVLVVAPRFLTSLIYQTQDPLG DAVWKDTEIQLPRWKRLEWVNGLTQEGIPAGDTLSVGAILKSFPVALLWGQSR
Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]
COG id: COG3280
COG function: function code G; Maltooligosyl trehalose synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013797 - InterPro: IPR012767 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.15 [H]
Molecular weight: Translated: 108371; Mature: 108371
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPTSTYRIQFHAGFDFEAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQI CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCCCCCCCEE NVELGGSEKFELLWETLNQQGIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFIDYFDV EEEECCCHHHHHHHHHHCCCCCHHHHHHCCCHHEECCCHHHHHHHHHCCCCCCCCEEEEC NWDHSYLGIKGRILAPFLGDFYNKCLESGQIQLRYDADGLSINYYNLRFPLNIDTYADVF CCCCCEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHH TYNLGKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSPH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQNFRLSFWKVGAEEINYRRFFTINDLISL HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCEEEEEHHHHHHH RMEDREVFRKTHQLILKLAEQGRFTGLRIDHIDGLFNPEEYLHRLRERCPDLYIVVEKIL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH EANEKLPQQWPVQGTTGYDFLAKLNGIFCQSENAEAFSALYQDFTNLQQSPEQVIEDKKR HHHHCCCCCCCCCCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH LIIERNLAGDMDNLAFLLKQITSHHRYANDFTLYSLRRALAEVLVCFPVYRVYIHEGILS HEEHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SEGQQAVRQAVEKAKENLPILVNELNFLQRFLCLEFPENVSEEEKNEQIYFAMRLQQLAG CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCHHCCCEEHHHHHHHHHHC PLMAKGVEDTAFYVYNRLLSLNEVGGDLYRFGISVQEFHRFNQERAAQWPFSMNASSTHD HHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHCHHHHHCCCCCCCCCCCCC TKRGEDVRARLNVLSELPAEWEKHIKLWHELNLGYKVRSKQAKRSELPDRNDEYFLYQTL CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCEEEHHHH IGSYPFQPEEVPTFIQRVKDYAIKAVREAKVHTAWLRPDTEYEEATLAFIDQILRPSSPF HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHH LESFLPFQRKIAHFGIFNSLSQTLLKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH LAYLEEIQRRIKQDPLQLIQDLLLHRHDGRIKLFLIHQVLKARQEQPQLFLEGSYIPLQV HHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCEEEECCEEEEEE SGSYANHVIAFARQHDKQVVLVVAPRFLTSLIYQTQDPLGDAVWKDTEIQLPRWKRLEWV CCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHH NGLTQEGIPAGDTLSVGAILKSFPVALLWGQSR CCCHHCCCCCCCCHHHHHHHHHCCEEEEECCCC >Mature Secondary Structure MRIPTSTYRIQFHAGFDFEAARQIVPYLKLLGISDLYASPIFQARKGSTHGYDVVDPRQI CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCCCCCCCEE NVELGGSEKFELLWETLNQQGIGWIQDIVPNHMAYDGQNQMLMDVLESGPNSDFIDYFDV EEEECCCHHHHHHHHHHCCCCCHHHHHHCCCHHEECCCHHHHHHHHHCCCCCCCCEEEEC NWDHSYLGIKGRILAPFLGDFYNKCLESGQIQLRYDADGLSINYYNLRFPLNIDTYADVF CCCCCEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCCCHHHHHH TYNLGKLRRKLGRSHPDYVKLLGILFSLKFIPSKEDLLERTDQISFAKHSLWELYTSSPH HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH IQSFFDENIAIFNGKPGDPSSFDLLDSLLARQNFRLSFWKVGAEEINYRRFFTINDLISL HHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHCCCEEEEEHHHHHHH RMEDREVFRKTHQLILKLAEQGRFTGLRIDHIDGLFNPEEYLHRLRERCPDLYIVVEKIL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH EANEKLPQQWPVQGTTGYDFLAKLNGIFCQSENAEAFSALYQDFTNLQQSPEQVIEDKKR HHHHCCCCCCCCCCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH LIIERNLAGDMDNLAFLLKQITSHHRYANDFTLYSLRRALAEVLVCFPVYRVYIHEGILS HEEHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SEGQQAVRQAVEKAKENLPILVNELNFLQRFLCLEFPENVSEEEKNEQIYFAMRLQQLAG CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCHHCCCEEHHHHHHHHHHC PLMAKGVEDTAFYVYNRLLSLNEVGGDLYRFGISVQEFHRFNQERAAQWPFSMNASSTHD HHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHCHHHHHCCCCCCCCCCCCC TKRGEDVRARLNVLSELPAEWEKHIKLWHELNLGYKVRSKQAKRSELPDRNDEYFLYQTL CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCEEEHHHH IGSYPFQPEEVPTFIQRVKDYAIKAVREAKVHTAWLRPDTEYEEATLAFIDQILRPSSPF HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCHH LESFLPFQRKIAHFGIFNSLSQTLLKLTSPGIPDIYQGTELWDLSMVDPDNRRPVDFSRR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHH LAYLEEIQRRIKQDPLQLIQDLLLHRHDGRIKLFLIHQVLKARQEQPQLFLEGSYIPLQV HHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCEEEECCEEEEEE SGSYANHVIAFARQHDKQVVLVVAPRFLTSLIYQTQDPLGDAVWKDTEIQLPRWKRLEWV CCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHH NGLTQEGIPAGDTLSVGAILKSFPVALLWGQSR CCCHHCCCCCCCCHHHHHHHHHCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8605217; 8611744 [H]