Click here to switch to the map view.

The map label for this gene is 86605116

Identifier: 86605116

GI number: 86605116

Start: 411428

End: 412021

Strand: Reverse

Name: 86605116

Synonym: CYA_0397

Alternate gene names: NA

Gene position: 412021-411428 (Counterclockwise)

Preceding gene: 86605118

Following gene: 86605115

Centisome position: 14.05

GC content: 52.19

Gene sequence:

>594_bases
ATGGCTAGGTATGTAAAACCGAGAGAAGCGGCGGATTATTTTGGGGTGTGTCTCCACACCTTGAGGCGATGGGAACAGAA
AGGCTGGATCAAAGCAATACGTACTCCATCTGGTAGGGCAAGAAGGTATGACCTCGACAGCTACATCAGAACGCCAAAGA
AAGCCAAACGAGTCGTTTTGTACGCCCGAGTCAGCAGTCGAGGGCAGAAACCAGACTTGGAGAGACAGATTGCAAGACTG
GTTAACCTCTATCCTGGAGCCGAAGTGGTCGGAGAGGTTGGCGGCGGTCTCGACTTCAAAAGACCAAAGTTCCTTGCCTT
ATTGGAACGAGTTCGTGCGGGAGATGTCGGAACGATTGTGGTCGCTCACCGGGATCGACTCTGCCGGTTTGGATTTGAGT
TCGTTGAGTGGTACTGCCGTCAATACGGGTGCGAAATCTTGGTTCTCGATGACGATCACCTTTCTCCCCAACAGGAACTG
GTTGAGGATATCCTCACCATCCTGCACTGCTTCAGCAGTCGGCTCTACGGACTCAGGAAATATCGGGCTGCAATCGAGAA
AGATACGGATTTATCCGGAGCCGGCGCTGGCTAA

Upstream 100 bases:

>100_bases
CAAGAGGTTTCAGAAGAGGGCGAGGGAGCATGACTCTAGTCAATGATATGCTGGACTATACTGAAAATAATGTACAATAT
GTTCAGTATGGCTGCTTGGT

Downstream 100 bases:

>100_bases
GGTCTGGAAGCGGTGGCAAGCGGCGTGCCGGTACTGCTACAACCAAGCGATTGCCTATCAGCGTCAGCATGGTGCTCCAA
GAACGGCCAGAAAGCTGCGG

Product: ISSoc2, resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIRTPKKAKRVVLYARVSSRGQKPDLERQIARL
VNLYPGAEVVGEVGGGLDFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQYGCEILVLDDDHLSPQQEL
VEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGAGAG

Sequences:

>Translated_197_residues
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIRTPKKAKRVVLYARVSSRGQKPDLERQIARL
VNLYPGAEVVGEVGGGLDFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQYGCEILVLDDDHLSPQQEL
VEDILTILHCFSSRLYGLRKYRAAIEKDTDLSGAGAG
>Mature_196_residues
ARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIRTPKKAKRVVLYARVSSRGQKPDLERQIARLV
NLYPGAEVVGEVGGGLDFKRPKFLALLERVRAGDVGTIVVAHRDRLCRFGFEFVEWYCRQYGCEILVLDDDHLSPQQELV
EDILTILHCFSSRLYGLRKYRAAIEKDTDLSGAGAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22592; Mature: 22461

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIRTPKKAKRVVL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEECHHHHHHCCHHHHHEEE
YARVSSRGQKPDLERQIARLVNLYPGAEVVGEVGGGLDFKRPKFLALLERVRAGDVGTIV
EEEHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEE
VAHRDRLCRFGFEFVEWYCRQYGCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRK
EHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRAAIEKDTDLSGAGAG
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ARYVKPREAADYFGVCLHTLRRWEQKGWIKAIRTPSGRARRYDLDSYIRTPKKAKRVVL
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEECHHHHHHCCHHHHHEEE
YARVSSRGQKPDLERQIARLVNLYPGAEVVGEVGGGLDFKRPKFLALLERVRAGDVGTIV
EEEHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEE
VAHRDRLCRFGFEFVEWYCRQYGCEILVLDDDHLSPQQELVEDILTILHCFSSRLYGLRK
EHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
YRAAIEKDTDLSGAGAG
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]