Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605108

Identifier: 86605108

GI number: 86605108

Start: 405100

End: 405408

Strand: Reverse

Name: 86605108

Synonym: CYA_0389

Alternate gene names: NA

Gene position: 405408-405100 (Counterclockwise)

Preceding gene: 86605109

Following gene: 86605105

Centisome position: 13.82

GC content: 61.81

Gene sequence:

>309_bases
ATGATCCTCGACAACCCTTTCTTTCCTTACATTGCCGTTATGGTGAGCGGGCTGGTGGCTGCTGTTGCCCTCGGTTCGAT
GGCTTTCTTCAACTCCAAGCGTCCTGCGGGCTGGGAGGGTGCTGCTCGTCCGCGATACGTGCCTCAGTATGGGCAAGAGG
GCGAGGCTCCGCCCGAGTGGGAAATTGGGTGGACGGAAAAGGCCGAGCGCTGGAACGGGCGATTGGCCATGCTGGGGTTT
GCCATGAGCATTGCGGTGGAAGCCCTGGTAGGTCACAGCGTGCTGGCCTCCGTCCTGGGGCTGCGCTGA

Upstream 100 bases:

>100_bases
CTGAGTTTTACGCAAGCATCAGGTCGGGCGTTTTGTCTGGGGGCTGCCCGATCGGCTCGCTACCCAGGCTATTGACTGTT
TCACTGAACCCAACAGGCCG

Downstream 100 bases:

>100_bases
GCTGGCTTCGACAGTGGATAGGCGGATCTGGCTAGCTTTCTTGGGCCGATTTGTCGGGATATCCCGAGAAGCCTAGGTTC
TCGTCTGTCAAGCGCTGGGT

Product: CAB/ELIP/HLIP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEWEIGWTEKAERWNGRLAMLGF
AMSIAVEALVGHSVLASVLGLR

Sequences:

>Translated_102_residues
MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEWEIGWTEKAERWNGRLAMLGF
AMSIAVEALVGHSVLASVLGLR
>Mature_102_residues
MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEWEIGWTEKAERWNGRLAMLGF
AMSIAVEALVGHSVLASVLGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11082; Mature: 11082

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EIGWTEKAERWNGRLAMLGFAMSIAVEALVGHSVLASVLGLR
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EIGWTEKAERWNGRLAMLGFAMSIAVEALVGHSVLASVLGLR
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA