| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605108
Identifier: 86605108
GI number: 86605108
Start: 405100
End: 405408
Strand: Reverse
Name: 86605108
Synonym: CYA_0389
Alternate gene names: NA
Gene position: 405408-405100 (Counterclockwise)
Preceding gene: 86605109
Following gene: 86605105
Centisome position: 13.82
GC content: 61.81
Gene sequence:
>309_bases ATGATCCTCGACAACCCTTTCTTTCCTTACATTGCCGTTATGGTGAGCGGGCTGGTGGCTGCTGTTGCCCTCGGTTCGAT GGCTTTCTTCAACTCCAAGCGTCCTGCGGGCTGGGAGGGTGCTGCTCGTCCGCGATACGTGCCTCAGTATGGGCAAGAGG GCGAGGCTCCGCCCGAGTGGGAAATTGGGTGGACGGAAAAGGCCGAGCGCTGGAACGGGCGATTGGCCATGCTGGGGTTT GCCATGAGCATTGCGGTGGAAGCCCTGGTAGGTCACAGCGTGCTGGCCTCCGTCCTGGGGCTGCGCTGA
Upstream 100 bases:
>100_bases CTGAGTTTTACGCAAGCATCAGGTCGGGCGTTTTGTCTGGGGGCTGCCCGATCGGCTCGCTACCCAGGCTATTGACTGTT TCACTGAACCCAACAGGCCG
Downstream 100 bases:
>100_bases GCTGGCTTCGACAGTGGATAGGCGGATCTGGCTAGCTTTCTTGGGCCGATTTGTCGGGATATCCCGAGAAGCCTAGGTTC TCGTCTGTCAAGCGCTGGGT
Product: CAB/ELIP/HLIP family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEWEIGWTEKAERWNGRLAMLGF AMSIAVEALVGHSVLASVLGLR
Sequences:
>Translated_102_residues MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEWEIGWTEKAERWNGRLAMLGF AMSIAVEALVGHSVLASVLGLR >Mature_102_residues MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEWEIGWTEKAERWNGRLAMLGF AMSIAVEALVGHSVLASVLGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11082; Mature: 11082
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EIGWTEKAERWNGRLAMLGFAMSIAVEALVGHSVLASVLGLR CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILDNPFFPYIAVMVSGLVAAVALGSMAFFNSKRPAGWEGAARPRYVPQYGQEGEAPPEW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EIGWTEKAERWNGRLAMLGFAMSIAVEALVGHSVLASVLGLR CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA