Click here to switch to the map view.

The map label for this gene is 86605109

Identifier: 86605109

GI number: 86605109

Start: 405519

End: 405737

Strand: Reverse

Name: 86605109

Synonym: CYA_0390

Alternate gene names: NA

Gene position: 405737-405519 (Counterclockwise)

Preceding gene: 86605112

Following gene: 86605108

Centisome position: 13.83

GC content: 60.27

Gene sequence:

>219_bases
ATGCAATCCTCTCCTAGGATCCCTTCTCGCCTGGACTCCGCTTCTGTGGCCCAATACTACGACACCACCAACGACTGGAT
CCCGGGCTGGACGGAGCAGGCGGAGCGTTGGAATGGCCGCCTGGCTATGGTGGGTTTGGTGATCAGCGTTGCCACAGAGG
CGCTGGTGGGTCACAGTGTTTTTGCCACCACTCTCGCTCAGTGGCTGGGACTGCGATAG

Upstream 100 bases:

>100_bases
TCTCGCCAGGGATCCCTACCTCCCCTCGCCAGTCGGAAAAGTTGTCAAGAACTGTAATTTTATGTTAAGTTTGTTTACGT
ACAGTTATGAGGCATTACCT

Downstream 100 bases:

>100_bases
TTGAGAACATCTGAGTTTTACGCAAGCATCAGGTCGGGCGTTTTGTCTGGGGGCTGCCCGATCGGCTCGCTACCCAGGCT
ATTGACTGTTTCACTGAACC

Product: CAB/ELIP/HLIP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMVGLVISVATEALVGHSVFATTLAQWLGLR

Sequences:

>Translated_72_residues
MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMVGLVISVATEALVGHSVFATTLAQWLGLR
>Mature_72_residues
MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMVGLVISVATEALVGHSVFATTLAQWLGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7978; Mature: 7978

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMVGLVISVATEALVGHSV
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FATTLAQWLGLR
HHHHHHHHHCCC
>Mature Secondary Structure
MQSSPRIPSRLDSASVAQYYDTTNDWIPGWTEQAERWNGRLAMVGLVISVATEALVGHSV
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FATTLAQWLGLR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA