Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86605076

Identifier: 86605076

GI number: 86605076

Start: 374567

End: 375007

Strand: Reverse

Name: 86605076

Synonym: CYA_0357

Alternate gene names: NA

Gene position: 375007-374567 (Counterclockwise)

Preceding gene: 86605077

Following gene: 86605075

Centisome position: 12.79

GC content: 60.54

Gene sequence:

>441_bases
ATGCTGCTGGCAGCCATCGTCCTGGGCCTCATCCTCAGTCAGGTTCAGCCGCTGCTGCCCGCTCCGCAAGATTTGCCAGG
GATCCCTAGGGAACCCCTTTCCTGGCAAGAGGTGCCCAAACAAAAGTACGCCTGGCACATCTGCTACGCCTTTTTGGGCA
ATATGGGGCTGATCAACATCGGCGGCGGCCTGGCGCTGGTGGCGTTGGGATCCCGCTTCACAGCCGGGCACCTGTTCTCC
CAGATTCTTCTTTTGGGGGGAATGCTGCACCCTGCCTCTTGGGCTTTGGTGGCTCTGACAGGTCTGGAAGGGTGGGGCTG
GCTGGGCAATGTCGGGGCGGTGGCGCTGGTGGTGATGGTGTTGTTTGTTCACCTGATCTTGGCTACCTACCGCTCGGGGC
AAGCCCTCCAAAAACTGACTCGATCCCGCATCCACCGCTAA

Upstream 100 bases:

>100_bases
AAAGACAGGATAGGCTAGGACGGGATCGAGAGAACCTGCAATGTTGGCACATCCTGAATTGGCCATCCCTGGCAAGCTCA
ATGTAAAGGCGGGAGTGGTG

Downstream 100 bases:

>100_bases
CTCGGCAGACAGTTGGGGTGAGAAACCGTTTAGCTTAAGATTGTTTTTAGCATTGTTGATGCTGACATTCGACATTAGGT
GGGCTGAGCATGGCGATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINIGGGLALVALGSRFTAGHLFS
QILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMVLFVHLILATYRSGQALQKLTRSRIHR

Sequences:

>Translated_146_residues
MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINIGGGLALVALGSRFTAGHLFS
QILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMVLFVHLILATYRSGQALQKLTRSRIHR
>Mature_146_residues
MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINIGGGLALVALGSRFTAGHLFS
QILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMVLFVHLILATYRSGQALQKLTRSRIHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15750; Mature: 15750

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCEEEE
GGGLALVALGSRFTAGHLFSQILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMV
CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LFVHLILATYRSGQALQKLTRSRIHR
HHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCEEEE
GGGLALVALGSRFTAGHLFSQILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMV
CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LFVHLILATYRSGQALQKLTRSRIHR
HHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA