| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86605076
Identifier: 86605076
GI number: 86605076
Start: 374567
End: 375007
Strand: Reverse
Name: 86605076
Synonym: CYA_0357
Alternate gene names: NA
Gene position: 375007-374567 (Counterclockwise)
Preceding gene: 86605077
Following gene: 86605075
Centisome position: 12.79
GC content: 60.54
Gene sequence:
>441_bases ATGCTGCTGGCAGCCATCGTCCTGGGCCTCATCCTCAGTCAGGTTCAGCCGCTGCTGCCCGCTCCGCAAGATTTGCCAGG GATCCCTAGGGAACCCCTTTCCTGGCAAGAGGTGCCCAAACAAAAGTACGCCTGGCACATCTGCTACGCCTTTTTGGGCA ATATGGGGCTGATCAACATCGGCGGCGGCCTGGCGCTGGTGGCGTTGGGATCCCGCTTCACAGCCGGGCACCTGTTCTCC CAGATTCTTCTTTTGGGGGGAATGCTGCACCCTGCCTCTTGGGCTTTGGTGGCTCTGACAGGTCTGGAAGGGTGGGGCTG GCTGGGCAATGTCGGGGCGGTGGCGCTGGTGGTGATGGTGTTGTTTGTTCACCTGATCTTGGCTACCTACCGCTCGGGGC AAGCCCTCCAAAAACTGACTCGATCCCGCATCCACCGCTAA
Upstream 100 bases:
>100_bases AAAGACAGGATAGGCTAGGACGGGATCGAGAGAACCTGCAATGTTGGCACATCCTGAATTGGCCATCCCTGGCAAGCTCA ATGTAAAGGCGGGAGTGGTG
Downstream 100 bases:
>100_bases CTCGGCAGACAGTTGGGGTGAGAAACCGTTTAGCTTAAGATTGTTTTTAGCATTGTTGATGCTGACATTCGACATTAGGT GGGCTGAGCATGGCGATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINIGGGLALVALGSRFTAGHLFS QILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMVLFVHLILATYRSGQALQKLTRSRIHR
Sequences:
>Translated_146_residues MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINIGGGLALVALGSRFTAGHLFS QILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMVLFVHLILATYRSGQALQKLTRSRIHR >Mature_146_residues MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINIGGGLALVALGSRFTAGHLFS QILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMVLFVHLILATYRSGQALQKLTRSRIHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15750; Mature: 15750
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINI CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCEEEE GGGLALVALGSRFTAGHLFSQILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMV CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LFVHLILATYRSGQALQKLTRSRIHR HHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure MLLAAIVLGLILSQVQPLLPAPQDLPGIPREPLSWQEVPKQKYAWHICYAFLGNMGLINI CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCEEEE GGGLALVALGSRFTAGHLFSQILLLGGMLHPASWALVALTGLEGWGWLGNVGAVALVVMV CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LFVHLILATYRSGQALQKLTRSRIHR HHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA