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The map label for this gene is gidA

Identifier: 86605018

GI number: 86605018

Start: 301889

End: 303820

Strand: Reverse

Name: gidA

Synonym: CYA_0296

Alternate gene names: 86605018

Gene position: 303820-301889 (Counterclockwise)

Preceding gene: 86605025

Following gene: 86605016

Centisome position: 10.36

GC content: 63.92

Gene sequence:

>1932_bases
ATGCTCAAAGTTGGACGGGACAATGTGGACTTTCTCGACCACTACGACGTGATCGTCGTGGGTGGGGGACACGCTGGCTG
TGAAGCGGCCCTGGCGGCAGCGCGGCTGGGCTGTAATACCTTGATGCTGACGTTGAACCTGGACAAGATCGCCTGGCAGC
CCTGTAACCCCGCTGTGGGGGGCCCGGCCAAGTCGCAACTGGTGCACGAAATCGACGCCCTTGGCGGCGAGATGGGCAAA
GTTACCGACCGCACCTATTTGCAAAAGCGGGTGCTCAACCGCTCGCGGGGGCCGGCGGTATGGGCCTTGCGGGCGCAAAC
CGACAAGCGGGAGTACGCGCGGGTAATGCGCTCGGTGGTGGAAAACCAGCCCAATCTGAGCATCCGCGAGGGCACTGTTA
CCGACCTGGTGCTGGGGCGCAACGATGAGGTGGTGGGCGTGGTTACCCATTTTGGCAGCGTCTTCGGCTGTGGGGCGGTG
ATCCTGACCACGGGCACCTTTCTGGGAGGGCGCATCTGGATTGGCCGCCACTGGCAGCCTGCTGGCAGAGCGGGGGAATT
TGCCGTCGAAGGCCTGACCGACACCCTGCGCCAACTGGGCTTTGAGACAGGTCGGCTGAAGACGGGCACCCCTGCCCGTG
TGGATCGCCGCAGCGTCGATTTTTCCGTGATGGAGCGGCAGCCAGGGGATCCCGACCTGCGCTGGTTTAGCTTTGACCCG
GAGGTGTGGGTGCCGCGGGAGCAGATGGACTGCTATCTCACCCGCACCACGCCGGAGACCCACCGCATCATCCGCGAAAA
CCTCCACGAGACGCCGGTCTACGGCGGCTGGGTGGAGGCCAAGGGGCCCCGCTACTGCCCCAGCATCGAAGACAAGATCG
TCCGCTTTGCCGACAAGGAAAGCCATCAAATTTTTATTGAGCCAGAGGGGCGGGATCTGCCGGAGCTCTACATCCAGGGG
TTCTCGACGGGGATGCCAGAAAAGATCCAGATCCAGATGCTGCGCTCCCTGCCCGGCCTGGAGCGGTGCGTCATGCTGCG
GCCTGCCTACGCCGTGGAATACGACTATCTGCCGGCCACCCAGCTCTACCCCACCCTGATGACCAAGAAGGTGCAGGGGC
TGTTCTGTGCCGGCCAAATTAACGGCACCACCGGCTACGAAGAAGCAGCAGCCCAGGGGCTCATTGCCGGGATCAACGCC
GCCCGGTTGGTGCAAGGCAAACCCTTAGTCACGCTGCCGCGGGAGTCCAGCTACATCGGCACCCTCATCGACGACCTCTG
CACCAAAGAGCTGCGGGAGCCCTACCGCATGCTCACCAGCCGCTCCGAATACCGCCTTATCCTACGCGCCGACAACGCCG
ACCAACGCCTCACCCCCCTGGGGCGGGAATGGGGCCTCATCGACGACCGCCGCTGGGCCCTCTTCCAGGCCAAGCAGGCC
CGCATTGCCGCCGAGATCGAGCGCCTGGAAACCCAGCGGGTTAAGGCCCACGACCCCGCCGGGATCCACCTCAGCCAACT
GACCGGCCAGGGGATCAAAGGATCCGCCACCTTGGCCGAGCTCCTGCGCCGCAACCCGATCCACTACGCCGACCTGCTAG
AGCTGGGGTTGGGAAATGAGGAGCTGGATCCCTTTGAGCAGGAGGCAGCAGAAATTGCTGTCAAATACAGCGGCTACATC
CAGCGGCAACAAGCCCAGATCGAGCAGGTGAGCAAGCAGTACCACCGCCCCCTGCCCCCCGATCTGGACTACCACTCCAT
CCCCACCCTCTCCAAAGAGTCGCGGGAGAAACTGGCAGCAGTCCGGCCTCTGACCGTAGGCCAGGCCGCTCGCATTGGCG
GCGTCAACCCCGCCGACATCAATGCCCTGCTCATCTACCTAGAGGTGAGACAACGTCAGAAGACGGCTGCTGCAGCTCCC
GTCGGGGCCTGA

Upstream 100 bases:

>100_bases
GAGATTTGGGGATAGCCCTCTATCCGTCGCTAGACTGGAGAAACAAGCTGTAACAACCTAATTGGGATAGGGGATCCCGG
TATTCCGCGGGGGCGATCCT

Downstream 100 bases:

>100_bases
CCGCAGCCGCCGCTCCCCTGGCCGTAGAGGGCAGGGATCTCTTCCAGGGTCAGGCGCGAGGCCACCCCCAGCTCCAGGGG
CGAGGTCTCTCCCCGCAGCC

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A

Number of amino acids: Translated: 643; Mature: 643

Protein sequence:

>643_residues
MLKVGRDNVDFLDHYDVIVVGGGHAGCEAALAAARLGCNTLMLTLNLDKIAWQPCNPAVGGPAKSQLVHEIDALGGEMGK
VTDRTYLQKRVLNRSRGPAVWALRAQTDKREYARVMRSVVENQPNLSIREGTVTDLVLGRNDEVVGVVTHFGSVFGCGAV
ILTTGTFLGGRIWIGRHWQPAGRAGEFAVEGLTDTLRQLGFETGRLKTGTPARVDRRSVDFSVMERQPGDPDLRWFSFDP
EVWVPREQMDCYLTRTTPETHRIIRENLHETPVYGGWVEAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRDLPELYIQG
FSTGMPEKIQIQMLRSLPGLERCVMLRPAYAVEYDYLPATQLYPTLMTKKVQGLFCAGQINGTTGYEEAAAQGLIAGINA
ARLVQGKPLVTLPRESSYIGTLIDDLCTKELREPYRMLTSRSEYRLILRADNADQRLTPLGREWGLIDDRRWALFQAKQA
RIAAEIERLETQRVKAHDPAGIHLSQLTGQGIKGSATLAELLRRNPIHYADLLELGLGNEELDPFEQEAAEIAVKYSGYI
QRQQAQIEQVSKQYHRPLPPDLDYHSIPTLSKESREKLAAVRPLTVGQAARIGGVNPADINALLIYLEVRQRQKTAAAAP
VGA

Sequences:

>Translated_643_residues
MLKVGRDNVDFLDHYDVIVVGGGHAGCEAALAAARLGCNTLMLTLNLDKIAWQPCNPAVGGPAKSQLVHEIDALGGEMGK
VTDRTYLQKRVLNRSRGPAVWALRAQTDKREYARVMRSVVENQPNLSIREGTVTDLVLGRNDEVVGVVTHFGSVFGCGAV
ILTTGTFLGGRIWIGRHWQPAGRAGEFAVEGLTDTLRQLGFETGRLKTGTPARVDRRSVDFSVMERQPGDPDLRWFSFDP
EVWVPREQMDCYLTRTTPETHRIIRENLHETPVYGGWVEAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRDLPELYIQG
FSTGMPEKIQIQMLRSLPGLERCVMLRPAYAVEYDYLPATQLYPTLMTKKVQGLFCAGQINGTTGYEEAAAQGLIAGINA
ARLVQGKPLVTLPRESSYIGTLIDDLCTKELREPYRMLTSRSEYRLILRADNADQRLTPLGREWGLIDDRRWALFQAKQA
RIAAEIERLETQRVKAHDPAGIHLSQLTGQGIKGSATLAELLRRNPIHYADLLELGLGNEELDPFEQEAAEIAVKYSGYI
QRQQAQIEQVSKQYHRPLPPDLDYHSIPTLSKESREKLAAVRPLTVGQAARIGGVNPADINALLIYLEVRQRQKTAAAAP
VGA
>Mature_643_residues
MLKVGRDNVDFLDHYDVIVVGGGHAGCEAALAAARLGCNTLMLTLNLDKIAWQPCNPAVGGPAKSQLVHEIDALGGEMGK
VTDRTYLQKRVLNRSRGPAVWALRAQTDKREYARVMRSVVENQPNLSIREGTVTDLVLGRNDEVVGVVTHFGSVFGCGAV
ILTTGTFLGGRIWIGRHWQPAGRAGEFAVEGLTDTLRQLGFETGRLKTGTPARVDRRSVDFSVMERQPGDPDLRWFSFDP
EVWVPREQMDCYLTRTTPETHRIIRENLHETPVYGGWVEAKGPRYCPSIEDKIVRFADKESHQIFIEPEGRDLPELYIQG
FSTGMPEKIQIQMLRSLPGLERCVMLRPAYAVEYDYLPATQLYPTLMTKKVQGLFCAGQINGTTGYEEAAAQGLIAGINA
ARLVQGKPLVTLPRESSYIGTLIDDLCTKELREPYRMLTSRSEYRLILRADNADQRLTPLGREWGLIDDRRWALFQAKQA
RIAAEIERLETQRVKAHDPAGIHLSQLTGQGIKGSATLAELLRRNPIHYADLLELGLGNEELDPFEQEAAEIAVKYSGYI
QRQQAQIEQVSKQYHRPLPPDLDYHSIPTLSKESREKLAAVRPLTVGQAARIGGVNPADINALLIYLEVRQRQKTAAAAP
VGA

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family

Homologues:

Organism=Homo sapiens, GI74024895, Length=658, Percent_Identity=42.7051671732523, Blast_Score=444, Evalue=1e-124,
Organism=Homo sapiens, GI19882217, Length=683, Percent_Identity=41.1420204978038, Blast_Score=430, Evalue=1e-120,
Organism=Homo sapiens, GI183227703, Length=698, Percent_Identity=40.2578796561605, Blast_Score=424, Evalue=1e-118,
Organism=Escherichia coli, GI2367273, Length=619, Percent_Identity=49.4345718901454, Blast_Score=570, Evalue=1e-164,
Organism=Caenorhabditis elegans, GI17534255, Length=622, Percent_Identity=40.8360128617363, Blast_Score=444, Evalue=1e-125,
Organism=Saccharomyces cerevisiae, GI6321202, Length=622, Percent_Identity=44.6945337620579, Blast_Score=480, Evalue=1e-136,
Organism=Drosophila melanogaster, GI24658174, Length=638, Percent_Identity=43.5736677115987, Blast_Score=455, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MNMG_SYNJA (Q2JXG8)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_473781.1
- ProteinModelPortal:   Q2JXG8
- SMR:   Q2JXG8
- STRING:   Q2JXG8
- GeneID:   3898042
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_0296
- TIGR:   CYA_0296
- eggNOG:   COG0445
- HOGENOM:   HBG284774
- OMA:   GIQFRVL
- ProtClustDB:   PRK05192
- BioCyc:   SSP321327:CYA_0296-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00129
- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595
- TIGRFAMs:   TIGR00136

Pfam domain/function: PF01134 GIDA

EC number: NA

Molecular weight: Translated: 71575; Mature: 71575

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVGRDNVDFLDHYDVIVVGGGHAGCEAALAAARLGCNTLMLTLNLDKIAWQPCNPAVG
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCC
GPAKSQLVHEIDALGGEMGKVTDRTYLQKRVLNRSRGPAVWALRAQTDKREYARVMRSVV
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
ENQPNLSIREGTVTDLVLGRNDEVVGVVTHFGSVFGCGAVILTTGTFLGGRIWIGRHWQP
CCCCCCEEECCCEEEEEECCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCC
AGRAGEFAVEGLTDTLRQLGFETGRLKTGTPARVDRRSVDFSVMERQPGDPDLRWFSFDP
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCEEEEECC
EVWVPREQMDCYLTRTTPETHRIIRENLHETPVYGGWVEAKGPRYCPSIEDKIVRFADKE
CEECCHHHCCEEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCCC
SHQIFIEPEGRDLPELYIQGFSTGMPEKIQIQMLRSLPGLERCVMLRPAYAVEYDYLPAT
CCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHEEECCCCEEEECCCCHH
QLYPTLMTKKVQGLFCAGQINGTTGYEEAAAQGLIAGINAARLVQGKPLVTLPRESSYIG
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHEECCCCEEECCCCCCHHH
TLIDDLCTKELREPYRMLTSRSEYRLILRADNADQRLTPLGREWGLIDDRRWALFQAKQA
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RIAAEIERLETQRVKAHDPAGIHLSQLTGQGIKGSATLAELLRRNPIHYADLLELGLGNE
HHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCC
ELDPFEQEAAEIAVKYSGYIQRQQAQIEQVSKQYHRPLPPDLDYHSIPTLSKESREKLAA
CCCHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
VRPLTVGQAARIGGVNPADINALLIYLEVRQRQKTAAAAPVGA
HCCCCCCCHHHCCCCCCCCCEEEEEEEEHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKVGRDNVDFLDHYDVIVVGGGHAGCEAALAAARLGCNTLMLTLNLDKIAWQPCNPAVG
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCC
GPAKSQLVHEIDALGGEMGKVTDRTYLQKRVLNRSRGPAVWALRAQTDKREYARVMRSVV
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
ENQPNLSIREGTVTDLVLGRNDEVVGVVTHFGSVFGCGAVILTTGTFLGGRIWIGRHWQP
CCCCCCEEECCCEEEEEECCCCCEEEHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCC
AGRAGEFAVEGLTDTLRQLGFETGRLKTGTPARVDRRSVDFSVMERQPGDPDLRWFSFDP
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCEEEEECC
EVWVPREQMDCYLTRTTPETHRIIRENLHETPVYGGWVEAKGPRYCPSIEDKIVRFADKE
CEECCHHHCCEEEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCCC
SHQIFIEPEGRDLPELYIQGFSTGMPEKIQIQMLRSLPGLERCVMLRPAYAVEYDYLPAT
CCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHEEECCCCEEEECCCCHH
QLYPTLMTKKVQGLFCAGQINGTTGYEEAAAQGLIAGINAARLVQGKPLVTLPRESSYIG
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCHHHEECCCCEEECCCCCCHHH
TLIDDLCTKELREPYRMLTSRSEYRLILRADNADQRLTPLGREWGLIDDRRWALFQAKQA
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
RIAAEIERLETQRVKAHDPAGIHLSQLTGQGIKGSATLAELLRRNPIHYADLLELGLGNE
HHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCC
ELDPFEQEAAEIAVKYSGYIQRQQAQIEQVSKQYHRPLPPDLDYHSIPTLSKESREKLAA
CCCHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
VRPLTVGQAARIGGVNPADINALLIYLEVRQRQKTAAAAPVGA
HCCCCCCCHHHCCCCCCCCCEEEEEEEEHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA