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The map label for this gene is 86604887

Identifier: 86604887

GI number: 86604887

Start: 154078

End: 154842

Strand: Reverse

Name: 86604887

Synonym: CYA_0157

Alternate gene names: NA

Gene position: 154842-154078 (Counterclockwise)

Preceding gene: 86604888

Following gene: 86604885

Centisome position: 5.28

GC content: 64.58

Gene sequence:

>765_bases
ATGTTGCGCCAGCTGCGACCGGTAGATAAGTCGGGGAAAATGGGATCCCTGCTGTGGCCGCTCCTTTTCGGCGCGTCCCT
CGCCCTATCTCCGGCCATCGAGCCTGCCTGGGGGCAGGAAACTTCTCAAAACCACGGCACCGCCTCCAACGTGCCTTTGC
TCAGCCGCTTGGATGCTCTGGAAGAGCTGCGGCAAGCGCTCAGCCTGCCCACCGCTTCCATCCAAACGGAGGCCGTGACA
CTGGATGGGCGGCGGCTGTTCTTGGTCGCCGCGCCACAGGGGGATCCCGGCAGCCTGCCGCCGGTGTCGCAGCGGGCCCG
CTCCATTCCCAACAGCGCCATTCGGGTGGTGGAGAACCTCTCCAACGGCTGGTCGCGGGTGGATCTGGGGATCGTGATCG
CCTACGAAAACGACCTGGAACAGGCCATCCGCATTACCGAGCAGGTGGCTCTACAGATGTATCGGGAGCCGGCCTGGCGG
GACAAGATCCGCGAGCCCCCCGAGATGCACGGCGTCGATGACCTGGGGGAGCGGGGGATTACATTGCGCATCTGGATCAA
GGTGCAACCGCTGCAGCAGTGGCGGGTGACGCGGGAATACCGCCGTCGCCTCAAGCATGCCTTCGACCAAGCCGGGATCC
AGATCCCGTTTCCGCAACAAGCCCTCTGGTTCCGCAGCCCACTGGAGATGCGCATCCAGGGCCTCAGCCCGGAAGAAACC
CACCGCCTTTTGCACCCAGTGACATCCTCTCCCGCTAGGCCCTGA

Upstream 100 bases:

>100_bases
GGGGCTGTTGCTCTTGGCCACCTATGCCATTCTCGGCATTGCTTTTTTCTTTTTGGAGTGAGGTTGTTCAAGTACTCCAC
ACCGCGGACGCAAACGATTC

Downstream 100 bases:

>100_bases
CGGGCTGTAGACGGGAGCTTCCGAGAATCACTTCCCGGAGTTGCTGCTTCAACGGACTGGTAAACCAGGATCCTCCACAG
CCAGAGAGCGGCAGTCCCAC

Product: small conductance mechanosensitive ion channel (MscS) family protein

Products: NA

Alternate protein names: Mechanosensitive Ion Channel; Transporter MscS Family; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel Family Protein; Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Protein; Mechanosensitive Ion Channel MscS; MscS Family Mechanosensitive Ion Channel; Ion Efflux Protein; Mechanosensitive Ion Channel-Like Protein; Small Mechanosensitive Channel; Mechanosensitive Small-Conductance Channel MscC; Mscs Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Channel-Like; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel MscS Family Protein

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLRQLRPVDKSGKMGSLLWPLLFGASLALSPAIEPAWGQETSQNHGTASNVPLLSRLDALEELRQALSLPTASIQTEAVT
LDGRRLFLVAAPQGDPGSLPPVSQRARSIPNSAIRVVENLSNGWSRVDLGIVIAYENDLEQAIRITEQVALQMYREPAWR
DKIREPPEMHGVDDLGERGITLRIWIKVQPLQQWRVTREYRRRLKHAFDQAGIQIPFPQQALWFRSPLEMRIQGLSPEET
HRLLHPVTSSPARP

Sequences:

>Translated_254_residues
MLRQLRPVDKSGKMGSLLWPLLFGASLALSPAIEPAWGQETSQNHGTASNVPLLSRLDALEELRQALSLPTASIQTEAVT
LDGRRLFLVAAPQGDPGSLPPVSQRARSIPNSAIRVVENLSNGWSRVDLGIVIAYENDLEQAIRITEQVALQMYREPAWR
DKIREPPEMHGVDDLGERGITLRIWIKVQPLQQWRVTREYRRRLKHAFDQAGIQIPFPQQALWFRSPLEMRIQGLSPEET
HRLLHPVTSSPARP
>Mature_254_residues
MLRQLRPVDKSGKMGSLLWPLLFGASLALSPAIEPAWGQETSQNHGTASNVPLLSRLDALEELRQALSLPTASIQTEAVT
LDGRRLFLVAAPQGDPGSLPPVSQRARSIPNSAIRVVENLSNGWSRVDLGIVIAYENDLEQAIRITEQVALQMYREPAWR
DKIREPPEMHGVDDLGERGITLRIWIKVQPLQQWRVTREYRRRLKHAFDQAGIQIPFPQQALWFRSPLEMRIQGLSPEET
HRLLHPVTSSPARP

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28628; Mature: 28628

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRQLRPVDKSGKMGSLLWPLLFGASLALSPAIEPAWGQETSQNHGTASNVPLLSRLDAL
CCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
EELRQALSLPTASIQTEAVTLDGRRLFLVAAPQGDPGSLPPVSQRARSIPNSAIRVVENL
HHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHH
SNGWSRVDLGIVIAYENDLEQAIRITEQVALQMYREPAWRDKIREPPEMHGVDDLGERGI
HCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCC
TLRIWIKVQPLQQWRVTREYRRRLKHAFDQAGIQIPFPQQALWFRSPLEMRIQGLSPEET
EEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHEEECCCHHHH
HRLLHPVTSSPARP
HHHHHCCCCCCCCC
>Mature Secondary Structure
MLRQLRPVDKSGKMGSLLWPLLFGASLALSPAIEPAWGQETSQNHGTASNVPLLSRLDAL
CCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
EELRQALSLPTASIQTEAVTLDGRRLFLVAAPQGDPGSLPPVSQRARSIPNSAIRVVENL
HHHHHHHCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHH
SNGWSRVDLGIVIAYENDLEQAIRITEQVALQMYREPAWRDKIREPPEMHGVDDLGERGI
HCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCCC
TLRIWIKVQPLQQWRVTREYRRRLKHAFDQAGIQIPFPQQALWFRSPLEMRIQGLSPEET
EEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHEEECCCHHHH
HRLLHPVTSSPARP
HHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA