| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is cax
Identifier: 86604888
GI number: 86604888
Start: 154882
End: 156000
Strand: Reverse
Name: cax
Synonym: CYA_0159
Alternate gene names: 86604888
Gene position: 156000-154882 (Counterclockwise)
Preceding gene: 86604889
Following gene: 86604887
Centisome position: 5.32
GC content: 59.61
Gene sequence:
>1119_bases ATGTTCCTGCTGCTGCTGGGGGTTCCCCTCTCGTGGACAGGCCACTTGCAGGGCTGGGATCCCAATCTGGTCTTCCTTTG TGCGGCCTTGGCGGTGGTGGCCTTGGCGAAGTTTATGGGTCAAGCCACCGAGGAGATCGCTGCCTTGACCGGGCCGACGA TCGGGGGACTGATCAACGCCACCTTTGGCAACGCCACCGAGCTAATCATTGGCCTGGTGGCGCTGCAGGCGGGACTGGTG GAGGTGGTGAAAGCCTCCATCACCGGCTCGATCATCAGCAACCTGCTGCTGGTGGCCGGGCTGGCCATGTTTTTGGGCGG CATTAAGTTTCGCGAGCAGAGCTTTCGGCCCGAAGTGGCGCGTATGAACGCCTCGGTAATGAACCTGGCGGTGGTGGCCC TGATCTTGCCCAGCGTGGTCACCTATGCCGACGCCAACTTGGGCGCGCTCTCCATCCAAGAGCTCTCTACAGCGGTGGCT TTGGTGCTGATCGGGGTTTATGGCCTTACCTTGCTGTTTTCCCTCAAAACCCACAGCTACCTTTACACCATTCACGAGGC AGAGGCGGCAGAACATGAAGCCGCTGCCCGTCTCGCCCCCAATCCGGTTTTGCAGGCAGAGGGATCCATTCCCCAAGTGT TGACGGCCCCGCCCGAGCGGGCCGGTTTGGGGTTTTGGCTGTTGGCCCTCTTGGGGTTGACGGTGTTGGTGGCGCTGGAG TCGGAACTGTTGGTGAGCACCCTGGAGCATACTCTGGAGCACTTGCACATTACCTCGCTGTTCATGGGGGTGATTTTGCT GCCGATCATCGGCAATGCGGCCGAACATGCGACGGCAATCACGGTGGCCATGAAAGACAAGATGGATCTCTCCTTCTCAG TATCTCTGGGCTCGACGATGCAAATTGCCCTGTTCGTGGCGCCTCTGTTGGTGCTGGCCGGGAACGTGCTGGGCCAGCCG ATGAACTTTAACTTCGGCACAGTGGAGCTGGTGGCCATTGCCGTCTCGGTGTTGCTGGTCAACTCCGTCAGCAGCGACGG TCGCTCCAACTGGCTGGAGGGGCTGTTGCTCTTGGCCACCTATGCCATTCTCGGCATTGCTTTTTTCTTTTTGGAGTGA
Upstream 100 bases:
>100_bases TCAGCCTCTATTCCCCGGAACTATGACTCTGGCCGATGCAAATTCTCTGGTTTCCTCAGTTCGCCCTGCAGCAGGCTGGC AGAGAGCGCTGAACGGCTTG
Downstream 100 bases:
>100_bases GGTTGTTCAAGTACTCCACACCGCGGACGCAAACGATTCATGTTGCGCCAGCTGCGACCGGTAGATAAGTCGGGGAAAAT GGGATCCCTGCTGTGGCCGC
Product: calcium/proton exchanger
Products: Na (I) [Periplasm]; Ca (II) [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MFLLLLGVPLSWTGHLQGWDPNLVFLCAALAVVALAKFMGQATEEIAALTGPTIGGLINATFGNATELIIGLVALQAGLV EVVKASITGSIISNLLLVAGLAMFLGGIKFREQSFRPEVARMNASVMNLAVVALILPSVVTYADANLGALSIQELSTAVA LVLIGVYGLTLLFSLKTHSYLYTIHEAEAAEHEAAARLAPNPVLQAEGSIPQVLTAPPERAGLGFWLLALLGLTVLVALE SELLVSTLEHTLEHLHITSLFMGVILLPIIGNAAEHATAITVAMKDKMDLSFSVSLGSTMQIALFVAPLLVLAGNVLGQP MNFNFGTVELVAIAVSVLLVNSVSSDGRSNWLEGLLLLATYAILGIAFFFLE
Sequences:
>Translated_372_residues MFLLLLGVPLSWTGHLQGWDPNLVFLCAALAVVALAKFMGQATEEIAALTGPTIGGLINATFGNATELIIGLVALQAGLV EVVKASITGSIISNLLLVAGLAMFLGGIKFREQSFRPEVARMNASVMNLAVVALILPSVVTYADANLGALSIQELSTAVA LVLIGVYGLTLLFSLKTHSYLYTIHEAEAAEHEAAARLAPNPVLQAEGSIPQVLTAPPERAGLGFWLLALLGLTVLVALE SELLVSTLEHTLEHLHITSLFMGVILLPIIGNAAEHATAITVAMKDKMDLSFSVSLGSTMQIALFVAPLLVLAGNVLGQP MNFNFGTVELVAIAVSVLLVNSVSSDGRSNWLEGLLLLATYAILGIAFFFLE >Mature_372_residues MFLLLLGVPLSWTGHLQGWDPNLVFLCAALAVVALAKFMGQATEEIAALTGPTIGGLINATFGNATELIIGLVALQAGLV EVVKASITGSIISNLLLVAGLAMFLGGIKFREQSFRPEVARMNASVMNLAVVALILPSVVTYADANLGALSIQELSTAVA LVLIGVYGLTLLFSLKTHSYLYTIHEAEAAEHEAAARLAPNPVLQAEGSIPQVLTAPPERAGLGFWLLALLGLTVLVALE SELLVSTLEHTLEHLHITSLFMGVILLPIIGNAAEHATAITVAMKDKMDLSFSVSLGSTMQIALFVAPLLVLAGNVLGQP MNFNFGTVELVAIAVSVLLVNSVSSDGRSNWLEGLLLLATYAILGIAFFFLE
Specific function: According To Ref.1 The Natural Activity Of This Protein Is As A Calcium/Proton Antiporter, But It Can Act As A Weak Sodium/Proton Antiporter. The Presence Of A Preferred Substrate And Normal Ph Cytoplasmic Values Might Prevent Significant Sodium/Proton An
COG id: COG0387
COG function: function code P; Ca2+/H+ antiporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320075, Length=375, Percent_Identity=39.4666666666667, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6324008, Length=397, Percent_Identity=25.9445843828715, Blast_Score=105, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004713 - InterPro: IPR004798 - InterPro: IPR004837 [H]
Pfam domain/function: PF01699 Na_Ca_ex [H]
EC number: NA
Molecular weight: Translated: 39102; Mature: 39102
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLLLGVPLSWTGHLQGWDPNLVFLCAALAVVALAKFMGQATEEIAALTGPTIGGLINA CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC TFGNATELIIGLVALQAGLVEVVKASITGSIISNLLLVAGLAMFLGGIKFREQSFRPEVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHH RMNASVMNLAVVALILPSVVTYADANLGALSIQELSTAVALVLIGVYGLTLLFSLKTHSY HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LYTIHEAEAAEHEAAARLAPNPVLQAEGSIPQVLTAPPERAGLGFWLLALLGLTVLVALE EEEEEHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SELLVSTLEHTLEHLHITSLFMGVILLPIIGNAAEHATAITVAMKDKMDLSFSVSLGSTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCCEEEEECCCHH QIALFVAPLLVLAGNVLGQPMNFNFGTVELVAIAVSVLLVNSVSSDGRSNWLEGLLLLAT HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YAILGIAFFFLE HHHHHHHHHHCC >Mature Secondary Structure MFLLLLGVPLSWTGHLQGWDPNLVFLCAALAVVALAKFMGQATEEIAALTGPTIGGLINA CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC TFGNATELIIGLVALQAGLVEVVKASITGSIISNLLLVAGLAMFLGGIKFREQSFRPEVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHH RMNASVMNLAVVALILPSVVTYADANLGALSIQELSTAVALVLIGVYGLTLLFSLKTHSY HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LYTIHEAEAAEHEAAARLAPNPVLQAEGSIPQVLTAPPERAGLGFWLLALLGLTVLVALE EEEEEHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH SELLVSTLEHTLEHLHITSLFMGVILLPIIGNAAEHATAITVAMKDKMDLSFSVSLGSTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCCCEEEEECCCHH QIALFVAPLLVLAGNVLGQPMNFNFGTVELVAIAVSVLLVNSVSSDGRSNWLEGLLLLAT HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YAILGIAFFFLE HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Cytoplasm]; Proton [Periplasm]; Ca (II) [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: Na (I) [Cytoplasm] + Proton [Periplasm] = Proton [Cytoplasm] + Na (I) [Periplasm] Ca (II) [Cytoplasm] + Proton [Periplasm] = Ca (II) [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]