| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604867
Identifier: 86604867
GI number: 86604867
Start: 131558
End: 133147
Strand: Reverse
Name: 86604867
Synonym: CYA_0137
Alternate gene names: NA
Gene position: 133147-131558 (Counterclockwise)
Preceding gene: 86604868
Following gene: 86604865
Centisome position: 4.54
GC content: 63.14
Gene sequence:
>1590_bases GTGCTGCCGAAAGCTGCTCTGTGGATTTTGGGCCTGGGCCTGCTTCTGCGCTGCTTGGTGGCTGCTCTGTTGCCACCGGG CTTTGACGAAGCCTACTACTACCTCTACACCCGCCATCTGGACTGGAGCTATTTTGACCATCCGCCGCTGGTGGCCTGGA CAACGGGCTTGGGGCCTGTTTTGACGGGGCAGGTGTCGGCTTTTTCGATTCGACTGGGATCCCTGCTGGCCTACACCGGC TCTTCCCTGTTGCTTTACCTGACGGCGACGCGGCTTTTTTCGCCACAGGCGGGGCTGATCACCCTGGCAACCATCAGCAT CGCCCCCATTTTCTGGATTGGGTTTGGGGTGCTGACCCTGCCGGATAGCCCGCTGATGGTGTTTACGGCGGCAACCCTGT GGGTGGCTGCCCAGGAGTTTTTTCCGGCTCCCTTGGCGGAGGGGAAATTGGGGGTCTATGGGGCAGCGCGCTACCGACCG GGGCCGCGGCTGGCGCTGATTGGGCTCTTGGTGGGTCTGGCCTGCCTGGGCAAATACCACGGCCTGGCGCTGGGGTTTGG CCTGGTGCTCTTTTGTCTGCTCAGCCCGGCCCACCGCTGCGCTCTTCGGTCGGGATGGGCGCTCTTGGCGGTGGTGGGGT TTTTGGCGGCCTTCAGCCCCGTTTTAATCTGGAACACCCAACAGGATTGGGTCTCCTTCCGCTTCCAGGGGGGGCGAGCA GTGCCGGAGGCAGGGTATCAACTGCAGGAGCTGGGGCTGACGGTGCTGCAGGAGATGGGGTACCTTTTCCCGACCTTGGG GATCCCTCTGCTGGGGCTGAGCTTGGCCGAGGGTGGGCGGGTGGGGCTGGCGCTGGTTCAGGGAAGACGCCTCACGGATC AGGAGCTGAAACAGCTTTTAATCTTGGCCTGTGGGCTGCCGCTGGTGTTGGCTTTTACCTTCATGGGAGGCTACCGGCCC ATCCTCCCCACCTGGCCCATGCCGGGGTTTTGGGTGCTGAGCTTGCTGTTGGGATCCCGCTGGGAACGGTGGCCAGGAGC AAGGCAGCTCTTGGCGGGGACGGCGGTGGCAGTGGGCCTGTTGGTGGCAGTGGGGCTGGCCCATGTGCGCTACGGCCTCC TCCAGGATCCCGGCGGGCTGGGCCTGTGGCCGGTGGAACGGGATCCCTCGACTCAGCTGATTGACATCGAACAGTTGCGG CGGCAGTTTCAGACGGATCCCCGCTTGGCCCAGGCTCTTGCAGAGGCGGATTTTATCTTCACCAACGTTTACTTTTTGGG CGGGCAGATCGGCATGGCCTTGGCGCCGCTGACGGAGAAGCCCCTCACCTGCCTGGATGAAGATCTGCGCGGCTTTGCCT TTTGGTCCCAACCTGAAGACTGGCTGGGCAAAGATGGGCTGCTGGTCACCTCCCAGCTGTTTTGGCCAAGAGCAGGGATC CAGGCTGTCTACGGCACCTACTTTGAACAAATTGAGCCAGTGGCAGAGGTTCCCCTGCGGCGGGCGGGCGCGGTGGCGCA AACCTTTCAGGTGTACCTGGCTCGGCAGATGCGCCAACCCTATCCCCGTCCCTACTCCCGCTTGCGCTAG
Upstream 100 bases:
>100_bases TTAGGCTCAGTTTATTCTGAGCCCCCACTTGGTTTTTTGGGGACAAGTCTGGCCAAAGCTGAGACAATAACACCTGTCCA CACGCTCAAGGGGATCCCCT
Downstream 100 bases:
>100_bases CAGCCACAGCGAGATACCTTTGGGTTCAACGCAAGAAAAGACAGTCTGGAGAGCATTAGGCAAATTTTGGGCAGCAAGAT TATTCGGTTGGATCTCTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Family; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase; Dolichol Monophosphate Mannose Synthase; Family; Glycosyltransferase Family; Glycosyl/Arabinosyl/Mannosyl Transferase; Dolichyl-Phosphate Mannosyltransferase; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPVLTGQVSAFSIRLGSLLAYTG SSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTLPDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRP GPRLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLLILACGLPLVLAFTFMGGYRP ILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGLLVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLR RQFQTDPRLAQALAEADFIFTNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR
Sequences:
>Translated_529_residues MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPVLTGQVSAFSIRLGSLLAYTG SSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTLPDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRP GPRLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLLILACGLPLVLAFTFMGGYRP ILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGLLVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLR RQFQTDPRLAQALAEADFIFTNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR >Mature_529_residues MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPVLTGQVSAFSIRLGSLLAYTG SSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTLPDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRP GPRLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLLILACGLPLVLAFTFMGGYRP ILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGLLVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLR RQFQTDPRLAQALAEADFIFTNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58016; Mature: 58016
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCH LTGQVSAFSIRLGSLLAYTGSSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTL HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHEEC PDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRPGPRLALIGLLVGLACLGKYH CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH GLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHEEEECCCCC VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLL CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH ILACGLPLVLAFTFMGGYRPILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGL HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLRRQFQTDPRLAQALAEADFIF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHH TNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI HHHHHCCCCHHHEECCCCCCCHHHHHHHHCCCEECCCCHHHCCCCCCEEEHHHHCCCHHH QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR HHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC >Mature Secondary Structure MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCH LTGQVSAFSIRLGSLLAYTGSSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTL HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHEEC PDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRPGPRLALIGLLVGLACLGKYH CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH GLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHEEEECCCCC VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLL CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH ILACGLPLVLAFTFMGGYRPILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGL HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLRRQFQTDPRLAQALAEADFIF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHH TNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI HHHHHCCCCHHHEECCCCCCCHHHHHHHHCCCEECCCCHHHCCCCCCEEEHHHHCCCHHH QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR HHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA