| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604868
Identifier: 86604868
GI number: 86604868
Start: 134068
End: 134361
Strand: Reverse
Name: 86604868
Synonym: CYA_0138
Alternate gene names: NA
Gene position: 134361-134068 (Counterclockwise)
Preceding gene: 86604869
Following gene: 86604867
Centisome position: 4.58
GC content: 54.42
Gene sequence:
>294_bases GTGGACGATCTGGTTGCTTTGCAAGCCACGCTGCAGAAGTACCTCGACAACGGCGCCCAACTGGGCTGGCTAATTGACCC GGAAAGCCGAAGAATCTACATCTATCGTCCCGGCCAGCCAGTACAAGTCCTGGAGCGCCCAGCTTATCTGCAAGAGGATT CTCTGGCTTTGCCCTGGATCTCGCAACCCAACTCTGCTCTCAAAATGAGCAAAGCTCTGTATTCCGGAAAACGGTCAAGT ATCACACCAGCAAGCAATAATGAGGGCAAGGCCCAGGGATCCCGACGGAGGTAA
Upstream 100 bases:
>100_bases CCTTACAAAAGTTTGTTTTTGTTTAGCGTTGCGTAGCGGAACAGCTTACCTCCGAGGAGCGCCATCGCTTTGCCTTCCTA GGCTCGGATTACGCTCCTCT
Downstream 100 bases:
>100_bases GCCTATAGGGATGAGATGTGTAGAGCAAACCCCCAGCAAGCGCGTTTGTCTAGAGCCTGGGGTTCCGCTGGTGGCTGCTG GCGTTATTTTCTTTGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MDDLVALQATLQKYLDNGAQLGWLIDPESRRIYIYRPGQPVQVLERPAYLQEDSLALPWISQPNSALKMSKALYSGKRSS ITPASNNEGKAQGSRRR
Sequences:
>Translated_97_residues MDDLVALQATLQKYLDNGAQLGWLIDPESRRIYIYRPGQPVQVLERPAYLQEDSLALPWISQPNSALKMSKALYSGKRSS ITPASNNEGKAQGSRRR >Mature_97_residues MDDLVALQATLQKYLDNGAQLGWLIDPESRRIYIYRPGQPVQVLERPAYLQEDSLALPWISQPNSALKMSKALYSGKRSS ITPASNNEGKAQGSRRR
Specific function: Unknown
COG id: COG4636
COG function: function code S; Uncharacterized protein conserved in cyanobacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10889; Mature: 10889
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLVALQATLQKYLDNGAQLGWLIDPESRRIYIYRPGQPVQVLERPAYLQEDSLALPWI CCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHCCCCCCCCCCEECCCC SQPNSALKMSKALYSGKRSSITPASNNEGKAQGSRRR CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDDLVALQATLQKYLDNGAQLGWLIDPESRRIYIYRPGQPVQVLERPAYLQEDSLALPWI CCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHCCCCCCCCCCEECCCC SQPNSALKMSKALYSGKRSSITPASNNEGKAQGSRRR CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA