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The map label for this gene is cas2-1

Identifier: 86604865

GI number: 86604865

Start: 130865

End: 131179

Strand: Reverse

Name: cas2-1

Synonym: CYA_0135

Alternate gene names: NA

Gene position: 131179-130865 (Counterclockwise)

Preceding gene: 86604867

Following gene: 86604864

Centisome position: 4.47

GC content: 59.05

Gene sequence:

>315_bases
TTGCCTGGTGAGCGGCAACCTAGAGTACGAAGCAATGGAGCTGCGCTGAGGCTATGGTTGGTTTGCTACGACGTGGTGGA
CGATAAGCGCCGACAACAGTTGGCCAAGCGCCTGGAACAGTGCTGCCAGCGAGCGCAATACTCCGTTGTTGAATGCCCCC
TGGACACTGCCGAGCTGGAAAAGTCGTGGCTGCCTCTGCTCAACCTCGAGGAAGATAGCCTGCAGGCCTACCCTCTGGAT
GCCACCGCCAAACGACGTACCAAGGTCTTCGGCGGGCCTCTCCCCTACGAGCCGCCGGACTACCTTATTTTGTGA

Upstream 100 bases:

>100_bases
AGCTGGAGCGCCGCTTCTGCGAGCCTTTGCTTTACCCTCCGCAATCGCGTCGCCTAGCCCTGAGCCAAATCGTGCTGGAG
CAAGCCCGCTGGCTGGGCCG

Downstream 100 bases:

>100_bases
GGTTCTCAGCTTAGCCGAGATTGTAAAGTTTTGGGGCCGATCCATCGGGGGGAGCCATTGCTAGCTTTTTTTGCGGGTGC
CATAAGATCTAGTAGCTTTT

Product: CRISPR-associated Cas2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MPGERQPRVRSNGAALRLWLVCYDVVDDKRRQQLAKRLEQCCQRAQYSVVECPLDTAELEKSWLPLLNLEEDSLQAYPLD
ATAKRRTKVFGGPLPYEPPDYLIL

Sequences:

>Translated_104_residues
MPGERQPRVRSNGAALRLWLVCYDVVDDKRRQQLAKRLEQCCQRAQYSVVECPLDTAELEKSWLPLLNLEEDSLQAYPLD
ATAKRRTKVFGGPLPYEPPDYLIL
>Mature_103_residues
PGERQPRVRSNGAALRLWLVCYDVVDDKRRQQLAKRLEQCCQRAQYSVVECPLDTAELEKSWLPLLNLEEDSLQAYPLDA
TAKRRTKVFGGPLPYEPPDYLIL

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12004; Mature: 11873

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGERQPRVRSNGAALRLWLVCYDVVDDKRRQQLAKRLEQCCQRAQYSVVECPLDTAELE
CCCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH
KSWLPLLNLEEDSLQAYPLDATAKRRTKVFGGPLPYEPPDYLIL
HHCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEEC
>Mature Secondary Structure 
PGERQPRVRSNGAALRLWLVCYDVVDDKRRQQLAKRLEQCCQRAQYSVVECPLDTAELE
CCCCCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH
KSWLPLLNLEEDSLQAYPLDATAKRRTKVFGGPLPYEPPDYLIL
HHCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA