Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86604867

Identifier: 86604867

GI number: 86604867

Start: 131558

End: 133147

Strand: Reverse

Name: 86604867

Synonym: CYA_0137

Alternate gene names: NA

Gene position: 133147-131558 (Counterclockwise)

Preceding gene: 86604868

Following gene: 86604865

Centisome position: 4.54

GC content: 63.14

Gene sequence:

>1590_bases
GTGCTGCCGAAAGCTGCTCTGTGGATTTTGGGCCTGGGCCTGCTTCTGCGCTGCTTGGTGGCTGCTCTGTTGCCACCGGG
CTTTGACGAAGCCTACTACTACCTCTACACCCGCCATCTGGACTGGAGCTATTTTGACCATCCGCCGCTGGTGGCCTGGA
CAACGGGCTTGGGGCCTGTTTTGACGGGGCAGGTGTCGGCTTTTTCGATTCGACTGGGATCCCTGCTGGCCTACACCGGC
TCTTCCCTGTTGCTTTACCTGACGGCGACGCGGCTTTTTTCGCCACAGGCGGGGCTGATCACCCTGGCAACCATCAGCAT
CGCCCCCATTTTCTGGATTGGGTTTGGGGTGCTGACCCTGCCGGATAGCCCGCTGATGGTGTTTACGGCGGCAACCCTGT
GGGTGGCTGCCCAGGAGTTTTTTCCGGCTCCCTTGGCGGAGGGGAAATTGGGGGTCTATGGGGCAGCGCGCTACCGACCG
GGGCCGCGGCTGGCGCTGATTGGGCTCTTGGTGGGTCTGGCCTGCCTGGGCAAATACCACGGCCTGGCGCTGGGGTTTGG
CCTGGTGCTCTTTTGTCTGCTCAGCCCGGCCCACCGCTGCGCTCTTCGGTCGGGATGGGCGCTCTTGGCGGTGGTGGGGT
TTTTGGCGGCCTTCAGCCCCGTTTTAATCTGGAACACCCAACAGGATTGGGTCTCCTTCCGCTTCCAGGGGGGGCGAGCA
GTGCCGGAGGCAGGGTATCAACTGCAGGAGCTGGGGCTGACGGTGCTGCAGGAGATGGGGTACCTTTTCCCGACCTTGGG
GATCCCTCTGCTGGGGCTGAGCTTGGCCGAGGGTGGGCGGGTGGGGCTGGCGCTGGTTCAGGGAAGACGCCTCACGGATC
AGGAGCTGAAACAGCTTTTAATCTTGGCCTGTGGGCTGCCGCTGGTGTTGGCTTTTACCTTCATGGGAGGCTACCGGCCC
ATCCTCCCCACCTGGCCCATGCCGGGGTTTTGGGTGCTGAGCTTGCTGTTGGGATCCCGCTGGGAACGGTGGCCAGGAGC
AAGGCAGCTCTTGGCGGGGACGGCGGTGGCAGTGGGCCTGTTGGTGGCAGTGGGGCTGGCCCATGTGCGCTACGGCCTCC
TCCAGGATCCCGGCGGGCTGGGCCTGTGGCCGGTGGAACGGGATCCCTCGACTCAGCTGATTGACATCGAACAGTTGCGG
CGGCAGTTTCAGACGGATCCCCGCTTGGCCCAGGCTCTTGCAGAGGCGGATTTTATCTTCACCAACGTTTACTTTTTGGG
CGGGCAGATCGGCATGGCCTTGGCGCCGCTGACGGAGAAGCCCCTCACCTGCCTGGATGAAGATCTGCGCGGCTTTGCCT
TTTGGTCCCAACCTGAAGACTGGCTGGGCAAAGATGGGCTGCTGGTCACCTCCCAGCTGTTTTGGCCAAGAGCAGGGATC
CAGGCTGTCTACGGCACCTACTTTGAACAAATTGAGCCAGTGGCAGAGGTTCCCCTGCGGCGGGCGGGCGCGGTGGCGCA
AACCTTTCAGGTGTACCTGGCTCGGCAGATGCGCCAACCCTATCCCCGTCCCTACTCCCGCTTGCGCTAG

Upstream 100 bases:

>100_bases
TTAGGCTCAGTTTATTCTGAGCCCCCACTTGGTTTTTTGGGGACAAGTCTGGCCAAAGCTGAGACAATAACACCTGTCCA
CACGCTCAAGGGGATCCCCT

Downstream 100 bases:

>100_bases
CAGCCACAGCGAGATACCTTTGGGTTCAACGCAAGAAAAGACAGTCTGGAGAGCATTAGGCAAATTTTGGGCAGCAAGAT
TATTCGGTTGGATCTCTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Family; Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase; Dolichol Monophosphate Mannose Synthase; Family; Glycosyltransferase Family; Glycosyl/Arabinosyl/Mannosyl Transferase; Dolichyl-Phosphate Mannosyltransferase; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPVLTGQVSAFSIRLGSLLAYTG
SSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTLPDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRP
GPRLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA
VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLLILACGLPLVLAFTFMGGYRP
ILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGLLVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLR
RQFQTDPRLAQALAEADFIFTNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI
QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR

Sequences:

>Translated_529_residues
MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPVLTGQVSAFSIRLGSLLAYTG
SSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTLPDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRP
GPRLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA
VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLLILACGLPLVLAFTFMGGYRP
ILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGLLVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLR
RQFQTDPRLAQALAEADFIFTNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI
QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR
>Mature_529_residues
MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPVLTGQVSAFSIRLGSLLAYTG
SSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTLPDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRP
GPRLALIGLLVGLACLGKYHGLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA
VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLLILACGLPLVLAFTFMGGYRP
ILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGLLVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLR
RQFQTDPRLAQALAEADFIFTNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI
QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58016; Mature: 58016

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCH
LTGQVSAFSIRLGSLLAYTGSSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTL
HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHEEC
PDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRPGPRLALIGLLVGLACLGKYH
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA
HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHEEEECCCCC
VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLL
CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
ILACGLPLVLAFTFMGGYRPILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLRRQFQTDPRLAQALAEADFIF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHH
TNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI
HHHHHCCCCHHHEECCCCCCCHHHHHHHHCCCEECCCCHHHCCCCCCEEEHHHHCCCHHH
QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR
HHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
>Mature Secondary Structure
MLPKAALWILGLGLLLRCLVAALLPPGFDEAYYYLYTRHLDWSYFDHPPLVAWTTGLGPV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCH
LTGQVSAFSIRLGSLLAYTGSSLLLYLTATRLFSPQAGLITLATISIAPIFWIGFGVLTL
HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHEEC
PDSPLMVFTAATLWVAAQEFFPAPLAEGKLGVYGAARYRPGPRLALIGLLVGLACLGKYH
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
GLALGFGLVLFCLLSPAHRCALRSGWALLAVVGFLAAFSPVLIWNTQQDWVSFRFQGGRA
HHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCHHHHEEEECCCCC
VPEAGYQLQELGLTVLQEMGYLFPTLGIPLLGLSLAEGGRVGLALVQGRRLTDQELKQLL
CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
ILACGLPLVLAFTFMGGYRPILPTWPMPGFWVLSLLLGSRWERWPGARQLLAGTAVAVGL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
LVAVGLAHVRYGLLQDPGGLGLWPVERDPSTQLIDIEQLRRQFQTDPRLAQALAEADFIF
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHHHHHHH
TNVYFLGGQIGMALAPLTEKPLTCLDEDLRGFAFWSQPEDWLGKDGLLVTSQLFWPRAGI
HHHHHCCCCHHHEECCCCCCCHHHHHHHHCCCEECCCCHHHCCCCCCEEEHHHHCCCHHH
QAVYGTYFEQIEPVAEVPLRRAGAVAQTFQVYLARQMRQPYPRPYSRLR
HHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA