Click here to switch to the map view.

The map label for this gene is gvpW

Identifier: 86604749

GI number: 86604749

Start: 16201

End: 16965

Strand: Reverse

Name: gvpW

Synonym: CYA_0016

Alternate gene names: NA

Gene position: 16965-16201 (Counterclockwise)

Preceding gene: 86604751

Following gene: 86604748

Centisome position: 0.58

GC content: 62.61

Gene sequence:

>765_bases
ATGCCAGTTTTACCGGAACCCAGCGAACAGAGCGCCGGCAGCCCCCTTTACACCTATGCCTTCTTGCCGATGCCAGACGC
GCCGCTTTGGCATTTCATTCAACAAACTCAAGGGATCCGCGGGCCGCTGCAGGTGTTTTCTCCCACAGGAGGCCGAATTG
CCGCTGCTGTGGAGCCGATGCCGGATCCTGCGTCGCTGCAGGCTTCGGATGAGGTGCTGCTGCGTTCTGCCCTGCGCCAC
GACCAGGTGATCTGCCGGCTGTTTGCCCAGATGCCGCTGCTGCCCCTGCGCTTTGGCACCTGCTTTCTCTCAGCCGAAAA
GCTGGGATCCCACCTATTGGCCCAGCAGGCGGAGTACGAACAGGCCCTCGCGGCCATCGGGGGAAGAGCCGAGTACTGCC
TGAAAGGAAAACTGTCGCCCCAGCCCCCCCCGGATCCCCAACCCGCTCCCAGCGGCACAGCCTATCTGTTGGCCCGCAAA
CAAGCCTATCTCCAGCAACGACAGGCCCAAGAGCGGCAAGAACAGGAGCTGGCGGCCCTGCAGCAGCTTTGGCCTTCTAC
CTGGCCAGTGCAAAGAGGGGATCCGCAGCCGGGAGAAGTCCTGCGGCTTTACTTCTTGCTCACCCCTGCCGAACGGGAAA
TGGCAGCCCAGCTCGCCCAAACCTGGGTAGCAGCACACCCCCACTGGCAATTGGACTGGAGCGAGTCCCTGCCCCCCTAT
CACTTTGTGGGTGCCCTGCGGGATCCCTCCAGATGTACTCAGTAG

Upstream 100 bases:

>100_bases
CTACCGCATCTTCAGGTCGCCAGTAGCAGCCCCCCAGGGCAAAAAGCGCCAGCAAGTTTGCTTAGACTGAGAGGAAAAGT
CTACGCCTCGATCCGAGCCA

Downstream 100 bases:

>100_bases
TGCCCTAGCAAAAGGATCCCGTTTCGCGCGCCCGGAAACCCTGACCCAGCGAGGATGCAATGTTTTGGCTGTAATTTTTC
AGGGTATTACTTACGGATTC

Product: gas vesicle protein W

Products: NA

Alternate protein names: Gas Vesicle Protein

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MPVLPEPSEQSAGSPLYTYAFLPMPDAPLWHFIQQTQGIRGPLQVFSPTGGRIAAAVEPMPDPASLQASDEVLLRSALRH
DQVICRLFAQMPLLPLRFGTCFLSAEKLGSHLLAQQAEYEQALAAIGGRAEYCLKGKLSPQPPPDPQPAPSGTAYLLARK
QAYLQQRQAQERQEQELAALQQLWPSTWPVQRGDPQPGEVLRLYFLLTPAEREMAAQLAQTWVAAHPHWQLDWSESLPPY
HFVGALRDPSRCTQ

Sequences:

>Translated_254_residues
MPVLPEPSEQSAGSPLYTYAFLPMPDAPLWHFIQQTQGIRGPLQVFSPTGGRIAAAVEPMPDPASLQASDEVLLRSALRH
DQVICRLFAQMPLLPLRFGTCFLSAEKLGSHLLAQQAEYEQALAAIGGRAEYCLKGKLSPQPPPDPQPAPSGTAYLLARK
QAYLQQRQAQERQEQELAALQQLWPSTWPVQRGDPQPGEVLRLYFLLTPAEREMAAQLAQTWVAAHPHWQLDWSESLPPY
HFVGALRDPSRCTQ
>Mature_253_residues
PVLPEPSEQSAGSPLYTYAFLPMPDAPLWHFIQQTQGIRGPLQVFSPTGGRIAAAVEPMPDPASLQASDEVLLRSALRHD
QVICRLFAQMPLLPLRFGTCFLSAEKLGSHLLAQQAEYEQALAAIGGRAEYCLKGKLSPQPPPDPQPAPSGTAYLLARKQ
AYLQQRQAQERQEQELAALQQLWPSTWPVQRGDPQPGEVLRLYFLLTPAEREMAAQLAQTWVAAHPHWQLDWSESLPPYH
FVGALRDPSRCTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28248; Mature: 28116

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLPEPSEQSAGSPLYTYAFLPMPDAPLWHFIQQTQGIRGPLQVFSPTGGRIAAAVEPM
CCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCC
PDPASLQASDEVLLRSALRHDQVICRLFAQMPLLPLRFGTCFLSAEKLGSHLLAQQAEYE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QALAAIGGRAEYCLKGKLSPQPPPDPQPAPSGTAYLLARKQAYLQQRQAQERQEQELAAL
HHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLWPSTWPVQRGDPQPGEVLRLYFLLTPAEREMAAQLAQTWVAAHPHWQLDWSESLPPY
HHHCCCCCCCCCCCCCHHHHEEEHHEECCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCH
HFVGALRDPSRCTQ
HHHHCCCCHHHCCC
>Mature Secondary Structure 
PVLPEPSEQSAGSPLYTYAFLPMPDAPLWHFIQQTQGIRGPLQVFSPTGGRIAAAVEPM
CCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCC
PDPASLQASDEVLLRSALRHDQVICRLFAQMPLLPLRFGTCFLSAEKLGSHLLAQQAEYE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QALAAIGGRAEYCLKGKLSPQPPPDPQPAPSGTAYLLARKQAYLQQRQAQERQEQELAAL
HHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLWPSTWPVQRGDPQPGEVLRLYFLLTPAEREMAAQLAQTWVAAHPHWQLDWSESLPPY
HHHCCCCCCCCCCCCCHHHHEEEHHEECCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCH
HFVGALRDPSRCTQ
HHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA