| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86604748
Identifier: 86604748
GI number: 86604748
Start: 15513
End: 16040
Strand: Reverse
Name: 86604748
Synonym: CYA_0015
Alternate gene names: NA
Gene position: 16040-15513 (Counterclockwise)
Preceding gene: 86604749
Following gene: 86604747
Centisome position: 0.55
GC content: 56.82
Gene sequence:
>528_bases ATGACCCTGGAAACATTTTTTACCCAGCTCAACGCCAACGGCTTAACGATTGCCATCCTGCTCTTTGCAGCTCCTTGGTT GGTTTGGGTTCTCTGCCACTGGATCCCAGGGCAGTGGGAAGAGCCTTTTTTGCTCAGCTTGAACATTGGCTTAGCAGCGG CAAGCCTTGTCCTCTGGGCCGGTTACTTGGCCTATGCCACCAACACGGCCGGCTGGCAGGCGGTGGTCAAGCAGGCGGAT ATGTTCTTGTTGCTGGTGCCTCCCTACTATTTCCTTAGCTCCATCTGGGTGGCACGGCAGCGCATGCCCCTCTCGCGGGT GCCGGCTTTCCGCACCTTGCAAGGGATCAGCATTTTGGCGGCGGTCTATCTCATCCTCTCTTGGCTCAGCCGCCGGGTCT ATGTTGTCTTTTTCTCTTACCTACCCTTTTCGGCCTTTCTGTGGATCCTGGCGGGGTTGTTGGGGGTGGCCTATATTGGC TATCGCATCCTCTTTGGGAATCCGCCCCAGTACCCGCCCGAAAGCTGA
Upstream 100 bases:
>100_bases TGTTTTGGCTGTAATTTTTCAGGGTATTACTTACGGATTCTGGTGAGGGATGGGACTACACTACTATTTTTGAAAGTGAC CTCCCGTCCCCTCAGCCGTC
Downstream 100 bases:
>100_bases GGGGCTGGCCGACAGGGACTAGAATTCGAAAGAAACCCTTTGCAACGGCAATGGTGACAGTCCCTCTGATTTCAGCCCTG AACATCGACTACCGGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTLETFFTQLNANGLTIAILLFAAPWLVWVLCHWIPGQWEEPFLLSLNIGLAAASLVLWAGYLAYATNTAGWQAVVKQAD MFLLLVPPYYFLSSIWVARQRMPLSRVPAFRTLQGISILAAVYLILSWLSRRVYVVFFSYLPFSAFLWILAGLLGVAYIG YRILFGNPPQYPPES
Sequences:
>Translated_175_residues MTLETFFTQLNANGLTIAILLFAAPWLVWVLCHWIPGQWEEPFLLSLNIGLAAASLVLWAGYLAYATNTAGWQAVVKQAD MFLLLVPPYYFLSSIWVARQRMPLSRVPAFRTLQGISILAAVYLILSWLSRRVYVVFFSYLPFSAFLWILAGLLGVAYIG YRILFGNPPQYPPES >Mature_174_residues TLETFFTQLNANGLTIAILLFAAPWLVWVLCHWIPGQWEEPFLLSLNIGLAAASLVLWAGYLAYATNTAGWQAVVKQADM FLLLVPPYYFLSSIWVARQRMPLSRVPAFRTLQGISILAAVYLILSWLSRRVYVVFFSYLPFSAFLWILAGLLGVAYIGY RILFGNPPQYPPES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19798; Mature: 19666
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLETFFTQLNANGLTIAILLFAAPWLVWVLCHWIPGQWEEPFLLSLNIGLAAASLVLWA CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHH GYLAYATNTAGWQAVVKQADMFLLLVPPYYFLSSIWVARQRMPLSRVPAFRTLQGISILA HHHHHHCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH AVYLILSWLSRRVYVVFFSYLPFSAFLWILAGLLGVAYIGYRILFGNPPQYPPES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC >Mature Secondary Structure TLETFFTQLNANGLTIAILLFAAPWLVWVLCHWIPGQWEEPFLLSLNIGLAAASLVLWA CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHH GYLAYATNTAGWQAVVKQADMFLLLVPPYYFLSSIWVARQRMPLSRVPAFRTLQGISILA HHHHHHCCCHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHH AVYLILSWLSRRVYVVFFSYLPFSAFLWILAGLLGVAYIGYRILFGNPPQYPPES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA