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The map label for this gene is nagC [C]

Identifier: 86361291

GI number: 86361291

Start: 629408

End: 630544

Strand: Direct

Name: nagC [C]

Synonym: RHE_PF00563

Alternate gene names: 86361291

Gene position: 629408-630544 (Clockwise)

Preceding gene: 86361288

Following gene: 86361293

Centisome position: 97.96

GC content: 67.28

Gene sequence:

>1137_bases
ATGCGGTATCTTCGGTCAGGGCCGCGTCGGCTTCACGCGCAGGAGACAGGCCCCGCGCGCGCCAAAACGGTGGGTCTGAG
GTCGGGGGAAATCGCCGACCGGAATATTCGCGTCATTCTGGAAGCCATCCGCCGGCATGGGCCGCTGACGCGGACGGAGC
TTGGGCGCCATAGCGGGCTGACCGGGCCGGGCATCACCAATATCCTGCGTCGGCTCGCCGAAGAAAAGCTCGTGACGTCG
AACCGGCGCAACGGACTCGGCGGTGGGGCGACTGCCACGGAATTCGCGCTGCGGCCGGAGGGCGCGTTTTCGATCGGCGT
CAAGCTTCGCCGGACGCGCGGCGAGATCGTGCTGATCGATCTCAGCGGTCAGGTGCATGACCGGGTCTATTTCGGCGTCG
AGCCGGAAGACGGGGTAGGCGCGGTGCATGCGGCGGTCAGGGACATCATCGATCGGCATGCGACATTGCCGATCGTCGGG
CTCGGGATCGCCGCCAACGATTGGAGCGATGCCCGCAGCGAGCAGCTTGCGGCGATGGCGACGATCCCACGCATCTACGT
CGAAAACGAATGCACGGCGAGCCTGCTTGCCGAGCGCACGATCGGCAGCGCCATGCCGGAGGGTGGGCTCGCGATGATCA
TCATCGACGACGACGTTCAGGCGGGCTTCCTCATCAGGGGGATTCCCTATTCCGGGGTGCACGGGCGGGCGGGCAGCATC
GGCGAAATGCTGACCGGGCCCGATAGTGTCCAGCTGAACACCGTCGTCGGTTTCGATTCCCTGCGCTCACGCATCGGCGA
CGAGGACTTCGCGCGCCTGCTCAAGGGCGAGGAGTTCTCCTCGCCGTTGCTGTCGCAGTGGATCCGCGACGCCGCCGGCC
ATCTGCTCGACCCGATCATCGCCATGGCCGGCTTCATCGCCCCGAGCGTGGTCATGATCGGCGGCGACCTGCCGCAGGGC
GTCATCGAAGCGCTGATCCATCAGCTTTCCGTCGAGCGGCGTGACACCTCGACCAGGCCGCTGCTGACGCCCTGGATTTC
GCCGATGCGGCCGGCAAGCTTCAGCGGCGGCGTGGCGCTGGGTGCGGCCCTCCTGCCCTTCCTCAACACCCTGCTGCTGC
CGCCGGCCTCGGCGTGA

Upstream 100 bases:

>100_bases
TTGATACAAAAAATTGCTTGAAGAGCCCATTTGGAAAATACTTGGCGACGGAACCAGCGAATAAGTATGCCAGCGAAATG
TTGCTCTAGGAAAGACAGTC

Downstream 100 bases:

>100_bases
GGCCAAAGGCGCTGCGCGCTTTGACCGGCTTACGCAAGCGCCTCGTCGGCGTGGCTGAGATCGGAGGCAAGGGCCTTGTC
GAGCACCTTCTGGACGTTGG

Product: putative transcriptional regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRYLRSGPRRLHAQETGPARAKTVGLRSGEIADRNIRVILEAIRRHGPLTRTELGRHSGLTGPGITNILRRLAEEKLVTS
NRRNGLGGGATATEFALRPEGAFSIGVKLRRTRGEIVLIDLSGQVHDRVYFGVEPEDGVGAVHAAVRDIIDRHATLPIVG
LGIAANDWSDARSEQLAAMATIPRIYVENECTASLLAERTIGSAMPEGGLAMIIIDDDVQAGFLIRGIPYSGVHGRAGSI
GEMLTGPDSVQLNTVVGFDSLRSRIGDEDFARLLKGEEFSSPLLSQWIRDAAGHLLDPIIAMAGFIAPSVVMIGGDLPQG
VIEALIHQLSVERRDTSTRPLLTPWISPMRPASFSGGVALGAALLPFLNTLLLPPASA

Sequences:

>Translated_378_residues
MRYLRSGPRRLHAQETGPARAKTVGLRSGEIADRNIRVILEAIRRHGPLTRTELGRHSGLTGPGITNILRRLAEEKLVTS
NRRNGLGGGATATEFALRPEGAFSIGVKLRRTRGEIVLIDLSGQVHDRVYFGVEPEDGVGAVHAAVRDIIDRHATLPIVG
LGIAANDWSDARSEQLAAMATIPRIYVENECTASLLAERTIGSAMPEGGLAMIIIDDDVQAGFLIRGIPYSGVHGRAGSI
GEMLTGPDSVQLNTVVGFDSLRSRIGDEDFARLLKGEEFSSPLLSQWIRDAAGHLLDPIIAMAGFIAPSVVMIGGDLPQG
VIEALIHQLSVERRDTSTRPLLTPWISPMRPASFSGGVALGAALLPFLNTLLLPPASA
>Mature_378_residues
MRYLRSGPRRLHAQETGPARAKTVGLRSGEIADRNIRVILEAIRRHGPLTRTELGRHSGLTGPGITNILRRLAEEKLVTS
NRRNGLGGGATATEFALRPEGAFSIGVKLRRTRGEIVLIDLSGQVHDRVYFGVEPEDGVGAVHAAVRDIIDRHATLPIVG
LGIAANDWSDARSEQLAAMATIPRIYVENECTASLLAERTIGSAMPEGGLAMIIIDDDVQAGFLIRGIPYSGVHGRAGSI
GEMLTGPDSVQLNTVVGFDSLRSRIGDEDFARLLKGEEFSSPLLSQWIRDAAGHLLDPIIAMAGFIAPSVVMIGGDLPQG
VIEALIHQLSVERRDTSTRPLLTPWISPMRPASFSGGVALGAALLPFLNTLLLPPASA

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 40404; Mature: 40404

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLRSGPRRLHAQETGPARAKTVGLRSGEIADRNIRVILEAIRRHGPLTRTELGRHSGL
CCCCCCCCHHCCCCCCCCCHHHEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCC
TGPGITNILRRLAEEKLVTSNRRNGLGGGATATEFALRPEGAFSIGVKLRRTRGEIVLID
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCEEECEEEEECCCCEEEEE
LSGQVHDRVYFGVEPEDGVGAVHAAVRDIIDRHATLPIVGLGIAANDWSDARSEQLAAMA
CCCCEECEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH
TIPRIYVENECTASLLAERTIGSAMPEGGLAMIIIDDDVQAGFLIRGIPYSGVHGRAGSI
HCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCC
GEMLTGPDSVQLNTVVGFDSLRSRIGDEDFARLLKGEEFSSPLLSQWIRDAAGHLLDPII
HHHCCCCCCEEEEEEECHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AMAGFIAPSVVMIGGDLPQGVIEALIHQLSVERRDTSTRPLLTPWISPMRPASFSGGVAL
HHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHH
GAALLPFLNTLLLPPASA
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRYLRSGPRRLHAQETGPARAKTVGLRSGEIADRNIRVILEAIRRHGPLTRTELGRHSGL
CCCCCCCCHHCCCCCCCCCHHHEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCC
TGPGITNILRRLAEEKLVTSNRRNGLGGGATATEFALRPEGAFSIGVKLRRTRGEIVLID
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCEEECEEEEECCCCEEEEE
LSGQVHDRVYFGVEPEDGVGAVHAAVRDIIDRHATLPIVGLGIAANDWSDARSEQLAAMA
CCCCEECEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH
TIPRIYVENECTASLLAERTIGSAMPEGGLAMIIIDDDVQAGFLIRGIPYSGVHGRAGSI
HCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCC
GEMLTGPDSVQLNTVVGFDSLRSRIGDEDFARLLKGEEFSSPLLSQWIRDAAGHLLDPII
HHHCCCCCCEEEEEEECHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
AMAGFIAPSVVMIGGDLPQGVIEALIHQLSVERRDTSTRPLLTPWISPMRPASFSGGVAL
HHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHH
GAALLPFLNTLLLPPASA
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]