| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is 86361265
Identifier: 86361265
GI number: 86361265
Start: 602146
End: 603186
Strand: Direct
Name: 86361265
Synonym: RHE_PF00536
Alternate gene names: NA
Gene position: 602146-603186 (Clockwise)
Preceding gene: 86361263
Following gene: 86361269
Centisome position: 93.72
GC content: 62.15
Gene sequence:
>1041_bases ATGAGGAACATCGAAATCGCGAACCTGACGCGCCGGACATTCGGCGGTGTCGCTCTGGGGCTGACGGCGGCAGGAATTCT TGGAGAGATGGCTGGCGCCGCGCAAGCGGAGCAACCGACCCCTGCCCCGGCCGCCGAGGCGACGCTGAACGCCAGCGAGC GTATTGATGCTGGAGACCTCAACATTGCCTATGCGGCGCTCGGCCCGGCCGATGGCTCGCCGGTTCTGCTCCTGCATGGC TGGCCCTACGATATCAATAGCTTCGCGAAAGTGGCTCCAATACTGGCCGACCGCGGACACCGGGTCATCGTTCCCTTTCT CCGCGGATATGGCGGCACGACGTTCCTGTCGGCAAAAACGAAACGCAACGGCCAGCAGTCGGCGCTCGCCCTGGACGCCA TCAAGCTCATGGATGCCCTGAAGATCGACAGGGCGACGGTCGCCGGCTTCGACTGGGGAGCTCGCACGGCCGATATCGTT GCCGCACTCTGGCCGGAACGGTGCAGAGGCCTCGTCTCGGTGAGCGGCTATCTCGTGGGAAGCCAGAGCGCCGGCAAACA GCCGCTGCCGCCATCCGCGGAGTTGCAGTGGTGGTACCAATATTACTTTGCTACCGAACGCGGCCGTGAGGGATACGAGA AATACACCAATGATTTCGCAAAGCTCATCTGGAAGCTGGCTTCGCCGCGCTGGAATTTCGATGATGCCACGTTCGAGCGG AGCGCGACTGCCTTTTCCAACCCCGATCACGTCGCCATCGTCGTCCATAACTATCGCTGGCGTCTGGGCCTGGCCGAGGG AGAAAAGCGGTTCGACAAATACGAGCAGAGGCTCGCCACCGGCCCCGAGATTACAGTGCCGACGATCACGCTGGAAGGAG ATGCCAATGGCGCACCGCATCCGGACCCCAAGGCCTATGCGGCGAAATTCAAAGCAAGATACGAGCATCGCGACATCGCC GGCGGCATCGGACACAACCTCCCTCAGGAAGCGCCTGAAGCCTTTGCCAAGGCCGTCATCGACGCCGATTCCTGGGCTTA A
Upstream 100 bases:
>100_bases CGCCCCCCTATGCCGCCCTTCACAGTCTTCCCGTCAACCGCGCGTGCCGCAGCCCTCCTCCGGAAGGCTTGCTGGTGCGC ATATCTTTGGAGACGGAACA
Downstream 100 bases:
>100_bases TCCCTAGCAAGAGCCAACGCAATTGTTCCACGCGCATTGCCGCGCGTGGAACATTCCGATTGGAGCTTGCGATCAACTCG CGCCAAAGATCAGCCGCTGA
Product: epoxide hydrolase protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Epoxide Hydrolase; Epoxide Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase; Alpha/Beta Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Hydrolase Alpha/Beta Fold; Epoxide Hydrolase EphB; Hydrolase Alpha/Beta Fold Family; Hydrolase Or Acyltransferase; Haloalkane Dehalogenase; Dehalogenase/Hydrolase; S33 Family Peptidase; Epoxide Hydrolase-Related Protein; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRNIEIANLTRRTFGGVALGLTAAGILGEMAGAAQAEQPTPAPAAEATLNASERIDAGDLNIAYAALGPADGSPVLLLHG WPYDINSFAKVAPILADRGHRVIVPFLRGYGGTTFLSAKTKRNGQQSALALDAIKLMDALKIDRATVAGFDWGARTADIV AALWPERCRGLVSVSGYLVGSQSAGKQPLPPSAELQWWYQYYFATERGREGYEKYTNDFAKLIWKLASPRWNFDDATFER SATAFSNPDHVAIVVHNYRWRLGLAEGEKRFDKYEQRLATGPEITVPTITLEGDANGAPHPDPKAYAAKFKARYEHRDIA GGIGHNLPQEAPEAFAKAVIDADSWA
Sequences:
>Translated_346_residues MRNIEIANLTRRTFGGVALGLTAAGILGEMAGAAQAEQPTPAPAAEATLNASERIDAGDLNIAYAALGPADGSPVLLLHG WPYDINSFAKVAPILADRGHRVIVPFLRGYGGTTFLSAKTKRNGQQSALALDAIKLMDALKIDRATVAGFDWGARTADIV AALWPERCRGLVSVSGYLVGSQSAGKQPLPPSAELQWWYQYYFATERGREGYEKYTNDFAKLIWKLASPRWNFDDATFER SATAFSNPDHVAIVVHNYRWRLGLAEGEKRFDKYEQRLATGPEITVPTITLEGDANGAPHPDPKAYAAKFKARYEHRDIA GGIGHNLPQEAPEAFAKAVIDADSWA >Mature_346_residues MRNIEIANLTRRTFGGVALGLTAAGILGEMAGAAQAEQPTPAPAAEATLNASERIDAGDLNIAYAALGPADGSPVLLLHG WPYDINSFAKVAPILADRGHRVIVPFLRGYGGTTFLSAKTKRNGQQSALALDAIKLMDALKIDRATVAGFDWGARTADIV AALWPERCRGLVSVSGYLVGSQSAGKQPLPPSAELQWWYQYYFATERGREGYEKYTNDFAKLIWKLASPRWNFDDATFER SATAFSNPDHVAIVVHNYRWRLGLAEGEKRFDKYEQRLATGPEITVPTITLEGDANGAPHPDPKAYAAKFKARYEHRDIA GGIGHNLPQEAPEAFAKAVIDADSWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37583; Mature: 37583
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIEIANLTRRTFGGVALGLTAAGILGEMAGAAQAEQPTPAPAAEATLNASERIDAGDL CCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCCCCCCC NIAYAALGPADGSPVLLLHGWPYDINSFAKVAPILADRGHRVIVPFLRGYGGTTFLSAKT EEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHCCCCCEEEEEHH KRNGQQSALALDAIKLMDALKIDRATVAGFDWGARTADIVAALWPERCRGLVSVSGYLVG CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCHHHCCCEEEEEEEEEE SQSAGKQPLPPSAELQWWYQYYFATERGREGYEKYTNDFAKLIWKLASPRWNFDDATFER CCCCCCCCCCCCCHHEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC SATAFSNPDHVAIVVHNYRWRLGLAEGEKRFDKYEQRLATGPEITVPTITLEGDANGAPH CCCCCCCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC PDPKAYAAKFKARYEHRDIAGGIGHNLPQEAPEAFAKAVIDADSWA CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRNIEIANLTRRTFGGVALGLTAAGILGEMAGAAQAEQPTPAPAAEATLNASERIDAGDL CCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCCCCCCC NIAYAALGPADGSPVLLLHGWPYDINSFAKVAPILADRGHRVIVPFLRGYGGTTFLSAKT EEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHCCCCCEEEEEHH KRNGQQSALALDAIKLMDALKIDRATVAGFDWGARTADIVAALWPERCRGLVSVSGYLVG CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCHHHCCCEEEEEEEEEE SQSAGKQPLPPSAELQWWYQYYFATERGREGYEKYTNDFAKLIWKLASPRWNFDDATFER CCCCCCCCCCCCCHHEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHC SATAFSNPDHVAIVVHNYRWRLGLAEGEKRFDKYEQRLATGPEITVPTITLEGDANGAPH CCCCCCCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC PDPKAYAAKFKARYEHRDIAGGIGHNLPQEAPEAFAKAVIDADSWA CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA