| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361253
Identifier: 86361253
GI number: 86361253
Start: 589027
End: 590241
Strand: Reverse
Name: 86361253
Synonym: RHE_PF00524
Alternate gene names: NA
Gene position: 590241-589027 (Counterclockwise)
Preceding gene: 86361261
Following gene: 86361248
Centisome position: 91.86
GC content: 63.62
Gene sequence:
>1215_bases ATGCAGATTACCAAGGACGCGGAGACCAGAACGCCGCGAGGGATGAGCCGCTCCGGACTGGCCCTCTTCTCTTACGGCTT TCGCCCCTTCTTTCTGGCGGCGGCATTGTGGGCGATCGTCAGTATCGGCCTCTGGGCAGCATTCCTGAACTACGGGGTCC CCGTGGCAAGCGACTACGGGGCGCTCTACTGGCACGCGCACGAGATGCTCTTCGGCTTCGCCCCTGCGGTTCTCGCCGGG TTCCTTCTCACCGCAGTTCCGAACTGGACCGGCCGCCTTCCCATATCAGGGCCTCCGCTCGCCGCGCTTTTTGCGATGTG GGGCGCCGGCCGGATCGCCATGTTGGCGAGCGACGGCATCGGAATGACGGCCGCCACCGCCATCGACAGCCTGTTCCTGC CGCTCATGCTCGCCTTATGCGCGCGGGAAGTGGTGGCGGGAAGGAAATGGAAGGATCTCAAGGTCGTCGCCGGCCTCGCC GTCCTGTCGGTCGCCAATTTATGCTTTCATATCCAGGTGATCGGAGGCGGAAATCCGGAGCTTTCCATTCGTCTCGGGCT CGGCGCCTACGTCCTGCTCATCACGATCGTCGGAGGGCGCATCCTGCCGAGTTTCACCCGAAACTGGATCAATCAGCGCG GCCGCACCGATTTCCCAGTCCCCTATAACCACTTCGATACCGCAACCATCATCGCCGGCGCCATGTCTCTCGCCAGCTGG GCGATCCGGCCCGACTCCATCGCAACTGGGTTCTTGGCGGCGGCCGCAGCTGCGATGAACGCAATCCGGCTCGCCCGCTG GCGGGGCTGGGTGACCTGGGGTGAACCGATCCTTTTCGTGCTGCACGCCGCCTATGGTTTCGTTCCTTTGGGATTTGCCG CGATCGCTTTCGGACCGATCGGGCTTTCCCAGGTCGCCGTTCTTCATATCTTCGCGATCGGCGCCATGTCGATGATGATG CTGGCGGTCATGACCCGGGCAAGCCGCGGCCATACGGGGCGGCAGCTCAAATCGAGCCGCGTGACCAACGCATCCTATCT CGTGCTTGCTGCCGTTGCTGTCCTGCGGCCCCTGGCGGAATTACTGCCTGCCGCCACCACGGAGATATTGTTGCTGTCTG CAGTCGGCTGGGCGGTGGCGTTCGGCCTGTTTGCGCTCGAACATGCCCCGGCGCTGTGCCGCGACCGGAAACCTCTCGTC GCGAGAAAGTCATGA
Upstream 100 bases:
>100_bases TTGTGCCGGCACAAAGTTCAAAGGCTCATCTTTGCGTAATCTCAACGACTGCTGTCCTGCGCCCGCGCATTTCTGTGTGA TCAAAATGGAGACATCGATC
Downstream 100 bases:
>100_bases GGGCGAATGCCGCCGCGCTTAAAAACGTGGCGGCCTCCGCATCTATTCCCTCGGCAGGCGTCCCATCATCTCCGGCGACC AGGCCGGATCGTAGACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NnrS Protein; Heme/Copper Membrane Protein; Protein Involved In Response NO; Heme-Cu Protein NnrS; Nnrs Family Protein; NnrS Transmembrane Protein; Transmembrane Protein; NnrS Dehydrogenase; Heme-Cu-Containing Membrane Protein; Heme/Copper Membrane Protein Of NnrS Family Protein; Nitrite And/Or Nitric Oxide Reductase; NnrS-Like Protein; Asparagine Synthetase B; ATP Synthase F0 Subunit A; Heme-Cu Membrane Protein; LOW QUALITY PROTEIN NnrS Family Protein; ATP Synthase F0 A Subunit; Integral Inner Membrane Permease; NnrS Protein Superfamily; Asparagine Synthetase
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MQITKDAETRTPRGMSRSGLALFSYGFRPFFLAAALWAIVSIGLWAAFLNYGVPVASDYGALYWHAHEMLFGFAPAVLAG FLLTAVPNWTGRLPISGPPLAALFAMWGAGRIAMLASDGIGMTAATAIDSLFLPLMLALCAREVVAGRKWKDLKVVAGLA VLSVANLCFHIQVIGGGNPELSIRLGLGAYVLLITIVGGRILPSFTRNWINQRGRTDFPVPYNHFDTATIIAGAMSLASW AIRPDSIATGFLAAAAAAMNAIRLARWRGWVTWGEPILFVLHAAYGFVPLGFAAIAFGPIGLSQVAVLHIFAIGAMSMMM LAVMTRASRGHTGRQLKSSRVTNASYLVLAAVAVLRPLAELLPAATTEILLLSAVGWAVAFGLFALEHAPALCRDRKPLV ARKS
Sequences:
>Translated_404_residues MQITKDAETRTPRGMSRSGLALFSYGFRPFFLAAALWAIVSIGLWAAFLNYGVPVASDYGALYWHAHEMLFGFAPAVLAG FLLTAVPNWTGRLPISGPPLAALFAMWGAGRIAMLASDGIGMTAATAIDSLFLPLMLALCAREVVAGRKWKDLKVVAGLA VLSVANLCFHIQVIGGGNPELSIRLGLGAYVLLITIVGGRILPSFTRNWINQRGRTDFPVPYNHFDTATIIAGAMSLASW AIRPDSIATGFLAAAAAAMNAIRLARWRGWVTWGEPILFVLHAAYGFVPLGFAAIAFGPIGLSQVAVLHIFAIGAMSMMM LAVMTRASRGHTGRQLKSSRVTNASYLVLAAVAVLRPLAELLPAATTEILLLSAVGWAVAFGLFALEHAPALCRDRKPLV ARKS >Mature_404_residues MQITKDAETRTPRGMSRSGLALFSYGFRPFFLAAALWAIVSIGLWAAFLNYGVPVASDYGALYWHAHEMLFGFAPAVLAG FLLTAVPNWTGRLPISGPPLAALFAMWGAGRIAMLASDGIGMTAATAIDSLFLPLMLALCAREVVAGRKWKDLKVVAGLA VLSVANLCFHIQVIGGGNPELSIRLGLGAYVLLITIVGGRILPSFTRNWINQRGRTDFPVPYNHFDTATIIAGAMSLASW AIRPDSIATGFLAAAAAAMNAIRLARWRGWVTWGEPILFVLHAAYGFVPLGFAAIAFGPIGLSQVAVLHIFAIGAMSMMM LAVMTRASRGHTGRQLKSSRVTNASYLVLAAVAVLRPLAELLPAATTEILLLSAVGWAVAFGLFALEHAPALCRDRKPLV ARKS
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43071; Mature: 43071
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITKDAETRTPRGMSRSGLALFSYGFRPFFLAAALWAIVSIGLWAAFLNYGVPVASDYG CCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ALYWHAHEMLFGFAPAVLAGFLLTAVPNWTGRLPISGPPLAALFAMWGAGRIAMLASDGI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCC GMTAATAIDSLFLPLMLALCAREVVAGRKWKDLKVVAGLAVLSVANLCFHIQVIGGGNPE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCC LSIRLGLGAYVLLITIVGGRILPSFTRNWINQRGRTDFPVPYNHFDTATIIAGAMSLASW EEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH AIRPDSIATGFLAAAAAAMNAIRLARWRGWVTWGEPILFVLHAAYGFVPLGFAAIAFGPI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCC GLSQVAVLHIFAIGAMSMMMLAVMTRASRGHTGRQLKSSRVTNASYLVLAAVAVLRPLAE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH LLPAATTEILLLSAVGWAVAFGLFALEHAPALCRDRKPLVARKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC >Mature Secondary Structure MQITKDAETRTPRGMSRSGLALFSYGFRPFFLAAALWAIVSIGLWAAFLNYGVPVASDYG CCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ALYWHAHEMLFGFAPAVLAGFLLTAVPNWTGRLPISGPPLAALFAMWGAGRIAMLASDGI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCC GMTAATAIDSLFLPLMLALCAREVVAGRKWKDLKVVAGLAVLSVANLCFHIQVIGGGNPE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCC LSIRLGLGAYVLLITIVGGRILPSFTRNWINQRGRTDFPVPYNHFDTATIIAGAMSLASW EEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH AIRPDSIATGFLAAAAAAMNAIRLARWRGWVTWGEPILFVLHAAYGFVPLGFAAIAFGPI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCC GLSQVAVLHIFAIGAMSMMMLAVMTRASRGHTGRQLKSSRVTNASYLVLAAVAVLRPLAE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH LLPAATTEILLLSAVGWAVAFGLFALEHAPALCRDRKPLVARKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA