| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
Click here to switch to the map view.
The map label for this gene is 86361240
Identifier: 86361240
GI number: 86361240
Start: 575925
End: 576452
Strand: Direct
Name: 86361240
Synonym: RHE_PF00511
Alternate gene names: NA
Gene position: 575925-576452 (Clockwise)
Preceding gene: 86361239
Following gene: 86361241
Centisome position: 89.64
GC content: 60.04
Gene sequence:
>528_bases ATGCTCAAGGCTATGGCCATTGCTTTCGTGGTGGTTGCCTGCGCGGCAGGCGCAGCCAATGCTCATGTCACCCTCGAGCA AGGCCAGGCGCAGCCAGGCCAGGCGTACAAGGCAATCCTTCGTGTCGGACACGGTTGCGAGGGCAAGGCAACGATCAAGA TCCGCGTGAATATCCCGGAGGGTCTGCTATCGGCAAAGCCGATGCCCAAACCCGGCTGGACCATCGACAAGGTCAATGCG GCCTATGAGAAGAGCTACGATCTGTACGGCAAGCCGGTGAAGGAAGGTATCAGCGAGATCGCATGGTCCGGCGGCAATCT TGCCGACGACGAATATGATGAATTCGTTTTCCGCGCGACGGTCGCGAAGGAAATCCCGCCCAAGACCCGCATCTACGTTC CCGTCGTCCAGGAATGCACCGAAGGCGCCGTCGAACGCTGGATCGAAATTCCCGCGGCAGGCAAGTCGTCGGACGACTAC GAAACCCCTGCCCCGTACTTCGACGTGGTCGAACAGCCGCGTTCGTGA
Upstream 100 bases:
>100_bases CGCAAGCGGCTCGATGCCGACCTCGCCAATATCACCCAGTGATCAATGAAAGCTGCGGATGGCCGCGCTTGCGCGCCATC CCGCACATTGGAGAATAATC
Downstream 100 bases:
>100_bases GCAGGCGGGAGCCGTCGATCATGCGGTCCTTGACGGCGGTCAACCTCGCGGCGCGGCTCCTGCAGGCGGCTTGCGCCGCT GCCATCATCGCGATGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLKAMAIAFVVVACAAGAANAHVTLEQGQAQPGQAYKAILRVGHGCEGKATIKIRVNIPEGLLSAKPMPKPGWTIDKVNA AYEKSYDLYGKPVKEGISEIAWSGGNLADDEYDEFVFRATVAKEIPPKTRIYVPVVQECTEGAVERWIEIPAAGKSSDDY ETPAPYFDVVEQPRS
Sequences:
>Translated_175_residues MLKAMAIAFVVVACAAGAANAHVTLEQGQAQPGQAYKAILRVGHGCEGKATIKIRVNIPEGLLSAKPMPKPGWTIDKVNA AYEKSYDLYGKPVKEGISEIAWSGGNLADDEYDEFVFRATVAKEIPPKTRIYVPVVQECTEGAVERWIEIPAAGKSSDDY ETPAPYFDVVEQPRS >Mature_175_residues MLKAMAIAFVVVACAAGAANAHVTLEQGQAQPGQAYKAILRVGHGCEGKATIKIRVNIPEGLLSAKPMPKPGWTIDKVNA AYEKSYDLYGKPVKEGISEIAWSGGNLADDEYDEFVFRATVAKEIPPKTRIYVPVVQECTEGAVERWIEIPAAGKSSDDY ETPAPYFDVVEQPRS
Specific function: Unknown
COG id: COG4549
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18955; Mature: 18955
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAMAIAFVVVACAAGAANAHVTLEQGQAQPGQAYKAILRVGHGCEGKATIKIRVNIPE CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCH GLLSAKPMPKPGWTIDKVNAAYEKSYDLYGKPVKEGISEIAWSGGNLADDEYDEFVFRAT HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH VAKEIPPKTRIYVPVVQECTEGAVERWIEIPAAGKSSDDYETPAPYFDVVEQPRS HHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MLKAMAIAFVVVACAAGAANAHVTLEQGQAQPGQAYKAILRVGHGCEGKATIKIRVNIPE CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCH GLLSAKPMPKPGWTIDKVNAAYEKSYDLYGKPVKEGISEIAWSGGNLADDEYDEFVFRAT HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH VAKEIPPKTRIYVPVVQECTEGAVERWIEIPAAGKSSDDYETPAPYFDVVEQPRS HHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA