| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361241
Identifier: 86361241
GI number: 86361241
Start: 576473
End: 578074
Strand: Direct
Name: 86361241
Synonym: RHE_PF00512
Alternate gene names: NA
Gene position: 576473-578074 (Clockwise)
Preceding gene: 86361240
Following gene: 86361243
Centisome position: 89.72
GC content: 63.11
Gene sequence:
>1602_bases ATGCGGTCCTTGACGGCGGTCAACCTCGCGGCGCGGCTCCTGCAGGCGGCTTGCGCCGCTGCCATCATCGCGATGGCCAC GTTTCTGCCGACAGCCGCGCTTGCTCACGCCGCTCTCAAAAGTTCGACGCCAGCCGCCAACGAGACGCTGGACCGGCTAC CGGCCGAAGTCGATCTGCATTTTAATGAACCTGTCCGACTTATCCGGGCAACGGCAAACGGGGATAGCGGCGCGAGCCGG GAATTGAATGCCGAGACAGCAGGTGCCGATGTCCGATTGCGCTTATCGGACCTGGATATCCGCGGCACCGTGATCGTCAG CTACCGCGTCGAGTCCGAAGACGGCCACCCCGTCGGCGGCGCGCTTGTGTTCAATGTCGGCGCACCTTCGGCTGGGTTGC CGGTTGCGGCCGGCCAGCCGGCCGATCTTTCTTTACCGATTGCCATCTGGCTCGTGCACACGGCCACGGTTCTGTTCCTG GCATTTGTCGTCGGCGGTGGGCTTTTCCACCGTTGGCTGGGCACCGGCGGCGGCCTGACGCCAGGCCTCGCAACCGTCTT GCCGCCTGCAACAGCTCTCTTGGTGGCGGGCCTCTATCTGCAGGGATTGGACGAAGCGGGAAGCGGCCTTGTCTTCGCCG GCGCAGGGCCGTTTCGGATCGCTCTGCAAGGCAATGCGGCGATTTGCGCCAGCCTGTTCCTTCTGTCGTTTCTGGTCGTC GCGCTTCCCTTCGCCGGCCGCAAGTTCGCCGGCCGCATACTTGCCGTCACGGCTCTGATAATCGCCACGAGCGGCTTTAC CTTCAGCGGGCATTGCAGCTTGGTTGACCCGCGCTGGCTGGCGAGGACCGCGATATTTCTCCACAGCGCGACGCTTCTGT TCTGGATAGGAAGCCTGCCGCCACTGTGGCGGCTCTGCCGGAGACCATTGGACCTGCGCCCGCTGGACAGCTTCTCGCGG AATATCCCCTATGCCTTCGTCATGATGGTCCTTGCCGGATTTGTACTGGCGATCGCGGAGCTCCCGGCTCTTTCCCATAT CCTGACGTCACTCTACGGCCGGATCCTCGTCGTCAAGATCATGTTGGTCGCGGCACTTTGCGTGCTCGCCGCCTATAACC GCTTCTGGCTGACAGGCGCGACTTTGGCGGGAGACGCGGTTGCGAGAGGGCGGCTGCGGCGAAACATTGTTATTGAAATC ATCCTGGCCGTCGCGATCATCGGCGCGGCCGGTCTCTGGCGATTTGCCGGGCCGGGGCAAGCGGACGCCGCCGAGGTTTC AGCAATGTCATCCGTGCATCTGCATGCCGACGAGGTGATGGCGCAACTCGAGCTGGAAGCCGGGAGCAACGGGACCGCAG ATATTCACGTCGCCGTCATGGCTCCCGATTTCAGGGCGCTCGATGCCCGGCAGGTCATTCTCCGCCTGAAGAACCCGGAA TCCGCAATCGAACCGATGAAGTTCGAACTGACCAAAGCGCCGGAGGGCGGATGGAAGGCGAGCGGCCTTCCGGTGAGGGA CCCGAAAGGCTGGCTGGCCGATCTGGAAGTGCTCATCGACGATTTTCATTCCGTGCATCTTGACGGCGACCTGTCGGAAT AA
Upstream 100 bases:
>100_bases TTCCCGCGGCAGGCAAGTCGTCGGACGACTACGAAACCCCTGCCCCGTACTTCGACGTGGTCGAACAGCCGCGTTCGTGA GCAGGCGGGAGCCGTCGATC
Downstream 100 bases:
>100_bases CCGCGGCGTCTACTTGCCTGACATGCACAACCGACCCATCGTTGAGGGATGAACAAGGCGCCGACACTCCTGTCCGGGCT TGCCGGCCATGCCGAGACGA
Product: putative copper export protein
Products: NA
Alternate protein names: Copper Export Protein; Copper Resistance D; Copper Resistance Protein; Copper Resistance D Domain-Containing Protein
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MRSLTAVNLAARLLQAACAAAIIAMATFLPTAALAHAALKSSTPAANETLDRLPAEVDLHFNEPVRLIRATANGDSGASR ELNAETAGADVRLRLSDLDIRGTVIVSYRVESEDGHPVGGALVFNVGAPSAGLPVAAGQPADLSLPIAIWLVHTATVLFL AFVVGGGLFHRWLGTGGGLTPGLATVLPPATALLVAGLYLQGLDEAGSGLVFAGAGPFRIALQGNAAICASLFLLSFLVV ALPFAGRKFAGRILAVTALIIATSGFTFSGHCSLVDPRWLARTAIFLHSATLLFWIGSLPPLWRLCRRPLDLRPLDSFSR NIPYAFVMMVLAGFVLAIAELPALSHILTSLYGRILVVKIMLVAALCVLAAYNRFWLTGATLAGDAVARGRLRRNIVIEI ILAVAIIGAAGLWRFAGPGQADAAEVSAMSSVHLHADEVMAQLELEAGSNGTADIHVAVMAPDFRALDARQVILRLKNPE SAIEPMKFELTKAPEGGWKASGLPVRDPKGWLADLEVLIDDFHSVHLDGDLSE
Sequences:
>Translated_533_residues MRSLTAVNLAARLLQAACAAAIIAMATFLPTAALAHAALKSSTPAANETLDRLPAEVDLHFNEPVRLIRATANGDSGASR ELNAETAGADVRLRLSDLDIRGTVIVSYRVESEDGHPVGGALVFNVGAPSAGLPVAAGQPADLSLPIAIWLVHTATVLFL AFVVGGGLFHRWLGTGGGLTPGLATVLPPATALLVAGLYLQGLDEAGSGLVFAGAGPFRIALQGNAAICASLFLLSFLVV ALPFAGRKFAGRILAVTALIIATSGFTFSGHCSLVDPRWLARTAIFLHSATLLFWIGSLPPLWRLCRRPLDLRPLDSFSR NIPYAFVMMVLAGFVLAIAELPALSHILTSLYGRILVVKIMLVAALCVLAAYNRFWLTGATLAGDAVARGRLRRNIVIEI ILAVAIIGAAGLWRFAGPGQADAAEVSAMSSVHLHADEVMAQLELEAGSNGTADIHVAVMAPDFRALDARQVILRLKNPE SAIEPMKFELTKAPEGGWKASGLPVRDPKGWLADLEVLIDDFHSVHLDGDLSE >Mature_533_residues MRSLTAVNLAARLLQAACAAAIIAMATFLPTAALAHAALKSSTPAANETLDRLPAEVDLHFNEPVRLIRATANGDSGASR ELNAETAGADVRLRLSDLDIRGTVIVSYRVESEDGHPVGGALVFNVGAPSAGLPVAAGQPADLSLPIAIWLVHTATVLFL AFVVGGGLFHRWLGTGGGLTPGLATVLPPATALLVAGLYLQGLDEAGSGLVFAGAGPFRIALQGNAAICASLFLLSFLVV ALPFAGRKFAGRILAVTALIIATSGFTFSGHCSLVDPRWLARTAIFLHSATLLFWIGSLPPLWRLCRRPLDLRPLDSFSR NIPYAFVMMVLAGFVLAIAELPALSHILTSLYGRILVVKIMLVAALCVLAAYNRFWLTGATLAGDAVARGRLRRNIVIEI ILAVAIIGAAGLWRFAGPGQADAAEVSAMSSVHLHADEVMAQLELEAGSNGTADIHVAVMAPDFRALDARQVILRLKNPE SAIEPMKFELTKAPEGGWKASGLPVRDPKGWLADLEVLIDDFHSVHLDGDLSE
Specific function: Unknown
COG id: COG1276
COG function: function code P; Putative copper export protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56121; Mature: 56121
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLTAVNLAARLLQAACAAAIIAMATFLPTAALAHAALKSSTPAANETLDRLPAEVDLH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEE FNEPVRLIRATANGDSGASRELNAETAGADVRLRLSDLDIRGTVIVSYRVESEDGHPVGG CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCCCCCC ALVFNVGAPSAGLPVAAGQPADLSLPIAIWLVHTATVLFLAFVVGGGLFHRWLGTGGGLT EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC PGLATVLPPATALLVAGLYLQGLDEAGSGLVFAGAGPFRIALQGNAAICASLFLLSFLVV CCHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHH ALPFAGRKFAGRILAVTALIIATSGFTFSGHCSLVDPRWLARTAIFLHSATLLFWIGSLP HHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC PLWRLCRRPLDLRPLDSFSRNIPYAFVMMVLAGFVLAIAELPALSHILTSLYGRILVVKI HHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLVAALCVLAAYNRFWLTGATLAGDAVARGRLRRNIVIEIILAVAIIGAAGLWRFAGPGQ HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADAAEVSAMSSVHLHADEVMAQLELEAGSNGTADIHVAVMAPDFRALDARQVILRLKNPE CCHHHHHHHHHHEECHHHHHHHHEEECCCCCCCEEEEEEECCCCHHHHHHHHHHEECCCH SAIEPMKFELTKAPEGGWKASGLPVRDPKGWLADLEVLIDDFHSVHLDGDLSE HHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MRSLTAVNLAARLLQAACAAAIIAMATFLPTAALAHAALKSSTPAANETLDRLPAEVDLH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEE FNEPVRLIRATANGDSGASRELNAETAGADVRLRLSDLDIRGTVIVSYRVESEDGHPVGG CCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCCCCCC ALVFNVGAPSAGLPVAAGQPADLSLPIAIWLVHTATVLFLAFVVGGGLFHRWLGTGGGLT EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCC PGLATVLPPATALLVAGLYLQGLDEAGSGLVFAGAGPFRIALQGNAAICASLFLLSFLVV CCHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHH ALPFAGRKFAGRILAVTALIIATSGFTFSGHCSLVDPRWLARTAIFLHSATLLFWIGSLP HHCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC PLWRLCRRPLDLRPLDSFSRNIPYAFVMMVLAGFVLAIAELPALSHILTSLYGRILVVKI HHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLVAALCVLAAYNRFWLTGATLAGDAVARGRLRRNIVIEIILAVAIIGAAGLWRFAGPGQ HHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADAAEVSAMSSVHLHADEVMAQLELEAGSNGTADIHVAVMAPDFRALDARQVILRLKNPE CCHHHHHHHHHHEECHHHHHHHHEEECCCCCCCEEEEEEECCCCHHHHHHHHHHEECCCH SAIEPMKFELTKAPEGGWKASGLPVRDPKGWLADLEVLIDDFHSVHLDGDLSE HHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA