| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361207
Identifier: 86361207
GI number: 86361207
Start: 538510
End: 539451
Strand: Reverse
Name: 86361207
Synonym: RHE_PF00477
Alternate gene names: NA
Gene position: 539451-538510 (Counterclockwise)
Preceding gene: 86361209
Following gene: 86361205
Centisome position: 83.96
GC content: 57.54
Gene sequence:
>942_bases ATGTTACCAGCAGCCGATTCTTCTCGCGACAGCCCACCCCAGCGCTGGAAGTTGCCGTTACTGAGCAACCGCCGCTCGTT ACGTCGGCCAGCGCTGTTTCTACTTGCCCTGCTTGTTGCAACCAGCGCCGTTTCTTACCTTGACATCCGTCAATCCGCAG GTCCGACCGAGGACTTTGAAAATCGAGCGTTCAACAAGGCTGCCCCTTCCTCACGCCCAGCCGTTCGCTCTGATCCAGCT GCTTCTTCTCCTCGTCCGACAATATCCATATCGCGGCATCTGATGGAGCTCCCAAAGCTCGACTTGGCAAGTCAGTTTCT GCGGATGTGGCTGGTCTCAGGCGCCAATATTTGCGGCGCTCTTCGAGAGGCCGGCATAGAGGTGAGTGAATGGAAGGCCG CATCGATGCGCAATCGCGACTATGAATGTTATTTTCAGCGCATCTACGAACGGGACGAGGTGCGGCCGCTCAGCTCGACC TTCCTGAGGGTTCGTGGAGATAAGACGGGTAATGTTGTTGAGATCCGGGCCAAGATCGTAGGGCCAGAGATCGATGCTGA GGGGCTTCTCGCCCCGGATGTGCTGCGCATTTTCGAGATCGTCGTGAAACAGGCGTGCTGGCGCGATTTTGAAGATGCGC TTGCGTCGATCCGAAGCCTTCGCCACGTCGAAACCGATCGATTCGGCTCTTATCTCAGCTTCACGCGTGAAGCCGGCAGC GAAAACAGCTTTAATTTTGCTCTTGGCCTCAAGGCGGCTCCAGGTTCACAGGCAAGGACCCGTGCGTATTTTTCGGCAGA CCGCTGGCTGGCCACGGCGAATCCGCGCACCCCTCAAACGTCCTCCGCATCGACCGGATCGGCGCATTCAGATCAGCCAA TGGCACTCAATATCGGAGCAAGTGCCGGTTCCGATCCAAGACCAAGCCGGAACTGCGGCTGA
Upstream 100 bases:
>100_bases TTTCACATCGTTGCTCGCCTCAAAGGATTGGTCGCGCGGATTGGCCGGGCACCGACCGGCACCGCTGGTCGCAAGCTTTC GAGGCAACGCAGTGAATAAA
Downstream 100 bases:
>100_bases GCATCAAAGCTCCCAGCGTTGTGAGTATGGAAAGTGTACCCACTTCGGGTATGGCGCGACAGCGGATCAGCGCGACAGGC TGGCTGCCGATCGAAAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Exopolysaccharide Synthesis Protein; Exopolysaccharide Synthesis Related Protein
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLPAADSSRDSPPQRWKLPLLSNRRSLRRPALFLLALLVATSAVSYLDIRQSAGPTEDFENRAFNKAAPSSRPAVRSDPA ASSPRPTISISRHLMELPKLDLASQFLRMWLVSGANICGALREAGIEVSEWKAASMRNRDYECYFQRIYERDEVRPLSST FLRVRGDKTGNVVEIRAKIVGPEIDAEGLLAPDVLRIFEIVVKQACWRDFEDALASIRSLRHVETDRFGSYLSFTREAGS ENSFNFALGLKAAPGSQARTRAYFSADRWLATANPRTPQTSSASTGSAHSDQPMALNIGASAGSDPRPSRNCG
Sequences:
>Translated_313_residues MLPAADSSRDSPPQRWKLPLLSNRRSLRRPALFLLALLVATSAVSYLDIRQSAGPTEDFENRAFNKAAPSSRPAVRSDPA ASSPRPTISISRHLMELPKLDLASQFLRMWLVSGANICGALREAGIEVSEWKAASMRNRDYECYFQRIYERDEVRPLSST FLRVRGDKTGNVVEIRAKIVGPEIDAEGLLAPDVLRIFEIVVKQACWRDFEDALASIRSLRHVETDRFGSYLSFTREAGS ENSFNFALGLKAAPGSQARTRAYFSADRWLATANPRTPQTSSASTGSAHSDQPMALNIGASAGSDPRPSRNCG >Mature_313_residues MLPAADSSRDSPPQRWKLPLLSNRRSLRRPALFLLALLVATSAVSYLDIRQSAGPTEDFENRAFNKAAPSSRPAVRSDPA ASSPRPTISISRHLMELPKLDLASQFLRMWLVSGANICGALREAGIEVSEWKAASMRNRDYECYFQRIYERDEVRPLSST FLRVRGDKTGNVVEIRAKIVGPEIDAEGLLAPDVLRIFEIVVKQACWRDFEDALASIRSLRHVETDRFGSYLSFTREAGS ENSFNFALGLKAAPGSQARTRAYFSADRWLATANPRTPQTSSASTGSAHSDQPMALNIGASAGSDPRPSRNCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34502; Mature: 34502
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPAADSSRDSPPQRWKLPLLSNRRSLRRPALFLLALLVATSAVSYLDIRQSAGPTEDFE CCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH NRAFNKAAPSSRPAVRSDPAASSPRPTISISRHLMELPKLDLASQFLRMWLVSGANICGA HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH LREAGIEVSEWKAASMRNRDYECYFQRIYERDEVRPLSSTFLRVRGDKTGNVVEIRAKIV HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHEEEECCCCCCEEEEEEEEE GPEIDAEGLLAPDVLRIFEIVVKQACWRDFEDALASIRSLRHVETDRFGSYLSFTREAGS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ENSFNFALGLKAAPGSQARTRAYFSADRWLATANPRTPQTSSASTGSAHSDQPMALNIGA CCCEEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECC SAGSDPRPSRNCG CCCCCCCCCCCCC >Mature Secondary Structure MLPAADSSRDSPPQRWKLPLLSNRRSLRRPALFLLALLVATSAVSYLDIRQSAGPTEDFE CCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH NRAFNKAAPSSRPAVRSDPAASSPRPTISISRHLMELPKLDLASQFLRMWLVSGANICGA HHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH LREAGIEVSEWKAASMRNRDYECYFQRIYERDEVRPLSSTFLRVRGDKTGNVVEIRAKIV HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHEEEECCCCCCEEEEEEEEE GPEIDAEGLLAPDVLRIFEIVVKQACWRDFEDALASIRSLRHVETDRFGSYLSFTREAGS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ENSFNFALGLKAAPGSQARTRAYFSADRWLATANPRTPQTSSASTGSAHSDQPMALNIGA CCCEEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECC SAGSDPRPSRNCG CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA