| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is fhuA
Identifier: 86361199
GI number: 86361199
Start: 528482
End: 530656
Strand: Reverse
Name: fhuA
Synonym: RHE_PF00469
Alternate gene names: 86361199
Gene position: 530656-528482 (Counterclockwise)
Preceding gene: 86361202
Following gene: 86361198
Centisome position: 82.59
GC content: 60.23
Gene sequence:
>2175_bases ATGGCGCGTGTTTTTTTGAATGTTTCTAATAATGTATCGCGAATTTACAGAGAAAGTCTTTTTGCGACGACCGCGATCCT CCTGATCGGCATTGCAGCATCGCCGGCTGCTGCCCAGAGCGCCTCCGCAGGTGACACCGCGACGACGCTGGAGCCAATCG TCATTCAAGGTGCATCCTCTGATAGCAAGGCCGACCGGACGTCGGTCACCGCCAAGAACAGCGCCGGCGCGACCAAGATC AGCACGCCGCTCGTCGAGACGCCACGTTCCGTTTCGGTCACCACCGAGAAGGAGATCGAGCAGCGCGGCGCCCAGACAGT CATCGAGGCGGTGCGTTATACGGCCGGCGTGACGACCGGGCCGAACGGCTTCGATCCGCGTTTCGACCAGATCTACATTC GCGGCTTCAACATCACCACAGTCGGAGACTTTCGTGACAGCCTGCGCCAGCCCTACATCAATTACGGCATGTTCCGCACC GATCCCTATCAGCTGCAGCGCGTCGAGGTGATCAAGGGACCGGTTTCCGTTCTCTACGGCGCGGGATCGCCGGGCGGCCT GATCAACAAGATATCGAAGCTTCCGACCGAGGAGCCGATCCGCGAAGTCGGCATCAGCTACGGCACTGAGGACCGGCTGC AGGGGATGTTCGATTTCGGTGGGCCGATCGGCGAAGGCAAAGACGATTTTCTCTATCGCATCGTCGGCCTCGCCCGCCGC GGTGATACCAATTTCGACATTGCCGACGACCGCTATTTCCTGGCGCCGTCCTTCACCTGGAAGCCCGACGAGGGCACGAT GTTCACGGTGTACGGCCTGGCGCAGTCGGACGAGACCGACTCCAACGTCGGCGCGATCACGACCTTGGACGGGAAGATCC ACGAGCTCAGGGAGAGCGATCCCGACTACGACGACCAGAAGGTCAGGCAGCAGCAGGTCGGCTATCAGTTCGAGCATGAA TTCGACAACGGCCTGACCTTCCGGCAGAACCTGCGTTACTCGCATCTCAATCTGGAGGCTCGCTATCTCGGTGTTACCGG CTGGACCGGGACCGTCGCGCATCGTGGCACAAATGCGATCCGCGACGAAATGAACGTGTTCCAGGTCGACAACCAGCTCG AATCGAAGTTCGACACGGGCCCGTTGGCCCATACGATGCTGTTCGGGCTCGACTACACCAATCTCCAGTCGAGCTTTGGC TACGGCGCCGGCGCTGCCGATCCGGCGTTCGACTTCGATATCGCCAATCCGACCTATGGTGTCTCGGGCGCCACGCCGGA CTACAGCATCCTGGCTTCCGATGCCGACATGCGGCAGGTCGGCATTTACGCGCTGGACCAGATCGAGGTCGGGAACTGGC GGTTCAACCTCGGCGGCCGGCAGACCTGGGTGAACCAGACGCGCGATGCGATTTTGCCCGCGGTCAGCTCGGAGGAGGTC GATAAGAACGCCTTCTCCTGGCAAGCCGGTGCCCTCTACCTCTTCGACAACGGCATTGCTCCCTTCGTCTCCTACGCCAC CTCGTTCGATCCGGTGACCAACCGTTCGACCTCAGGCAAGATCCTGGCGCCGACAGAGGGTGAACAGTACGAGGTAGGTG TGAAATACCAGCCGCCGGGCTCCGACATCCTGCTGTCGGCCATTGCCTATCACATCGTCGAAAAGAACAAGCCGGTGCTG GTCGACCCGCTGTTGTTTGCCTATGGATCGATCGGTGAGGTGACCGGAAAGGGTATCGAACTGGAAGCCCGCGCGGCGGT AGCCGATGGCTGGGATCTCATTGCGGCCTACACCTACAACCATTCAGAAGTGACGGGAGGCGGCGAAAACGAGGGCAATA CGCCAGCCCTCACACCTTCACATGTCGCCAGCCTCTGGGCCAACTACACGTTCCAGGAAACCAACCCCTTCCATGGCCTT TCCGTCGGCGCGGGTGTCCGTTATGTCAGCGAGAATTGGACGGATACGGCGAATACGTCAAAGAACCCCTCGAGCTTCTA CATCGACGCGTCCGCCGCTTATGACTTCGGCGCGGTCGACAAGAAATACGAAGGCCTGACTGCAGCCTTCAATATCCGCA ACATCGCCGATGAACGCGATACCGTTTGCAACGAGGGCTTCTGCTACCTCGGCCAGGGTCGCAACATGACCGGCACCCTG AAGTATCGGTGGTAG
Upstream 100 bases:
>100_bases AGATCATCGAATAAAAGCTGACAAAAATAATCACCTTATGTTGACAAGCTCTATTTCGCTCCATAGGTTCCGCCCGCATC CGTGACGTAGGGACCAAGCA
Downstream 100 bases:
>100_bases CACCATGGCGGCGGAGATGAACGGGGCGGCCTCACGCCCTTCGATCGCCGATCATCCTGTCGCCCACCAGGCGGTCGACC TCGACGGCCTGGTGGGCGAT
Product: ferrichrome-iron transporter, receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MARVFLNVSNNVSRIYRESLFATTAILLIGIAASPAAAQSASAGDTATTLEPIVIQGASSDSKADRTSVTAKNSAGATKI STPLVETPRSVSVTTEKEIEQRGAQTVIEAVRYTAGVTTGPNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYINYGMFRT DPYQLQRVEVIKGPVSVLYGAGSPGGLINKISKLPTEEPIREVGISYGTEDRLQGMFDFGGPIGEGKDDFLYRIVGLARR GDTNFDIADDRYFLAPSFTWKPDEGTMFTVYGLAQSDETDSNVGAITTLDGKIHELRESDPDYDDQKVRQQQVGYQFEHE FDNGLTFRQNLRYSHLNLEARYLGVTGWTGTVAHRGTNAIRDEMNVFQVDNQLESKFDTGPLAHTMLFGLDYTNLQSSFG YGAGAADPAFDFDIANPTYGVSGATPDYSILASDADMRQVGIYALDQIEVGNWRFNLGGRQTWVNQTRDAILPAVSSEEV DKNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPGSDILLSAIAYHIVEKNKPVL VDPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYNHSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGL SVGAGVRYVSENWTDTANTSKNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTGTL KYRW
Sequences:
>Translated_724_residues MARVFLNVSNNVSRIYRESLFATTAILLIGIAASPAAAQSASAGDTATTLEPIVIQGASSDSKADRTSVTAKNSAGATKI STPLVETPRSVSVTTEKEIEQRGAQTVIEAVRYTAGVTTGPNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYINYGMFRT DPYQLQRVEVIKGPVSVLYGAGSPGGLINKISKLPTEEPIREVGISYGTEDRLQGMFDFGGPIGEGKDDFLYRIVGLARR GDTNFDIADDRYFLAPSFTWKPDEGTMFTVYGLAQSDETDSNVGAITTLDGKIHELRESDPDYDDQKVRQQQVGYQFEHE FDNGLTFRQNLRYSHLNLEARYLGVTGWTGTVAHRGTNAIRDEMNVFQVDNQLESKFDTGPLAHTMLFGLDYTNLQSSFG YGAGAADPAFDFDIANPTYGVSGATPDYSILASDADMRQVGIYALDQIEVGNWRFNLGGRQTWVNQTRDAILPAVSSEEV DKNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPGSDILLSAIAYHIVEKNKPVL VDPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYNHSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGL SVGAGVRYVSENWTDTANTSKNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTGTL KYRW >Mature_723_residues ARVFLNVSNNVSRIYRESLFATTAILLIGIAASPAAAQSASAGDTATTLEPIVIQGASSDSKADRTSVTAKNSAGATKIS TPLVETPRSVSVTTEKEIEQRGAQTVIEAVRYTAGVTTGPNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYINYGMFRTD PYQLQRVEVIKGPVSVLYGAGSPGGLINKISKLPTEEPIREVGISYGTEDRLQGMFDFGGPIGEGKDDFLYRIVGLARRG DTNFDIADDRYFLAPSFTWKPDEGTMFTVYGLAQSDETDSNVGAITTLDGKIHELRESDPDYDDQKVRQQQVGYQFEHEF DNGLTFRQNLRYSHLNLEARYLGVTGWTGTVAHRGTNAIRDEMNVFQVDNQLESKFDTGPLAHTMLFGLDYTNLQSSFGY GAGAADPAFDFDIANPTYGVSGATPDYSILASDADMRQVGIYALDQIEVGNWRFNLGGRQTWVNQTRDAILPAVSSEEVD KNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPGSDILLSAIAYHIVEKNKPVLV DPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYNHSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGLS VGAGVRYVSENWTDTANTSKNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTGTLK YRW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=704, Percent_Identity=32.9545454545455, Blast_Score=347, Evalue=2e-96, Organism=Escherichia coli, GI1787344, Length=780, Percent_Identity=23.974358974359, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI1787024, Length=705, Percent_Identity=23.2624113475177, Blast_Score=116, Evalue=7e-27, Organism=Escherichia coli, GI1790743, Length=683, Percent_Identity=22.4011713030747, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79085; Mature: 78954
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVFLNVSNNVSRIYRESLFATTAILLIGIAASPAAAQSASAGDTATTLEPIVIQGASS CEEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCHHCCCCCCCCCCCCCEEEEECCCC DSKADRTSVTAKNSAGATKISTPLVETPRSVSVTTEKEIEQRGAQTVIEAVRYTAGVTTG CCCCCCCEEEECCCCCCCEECCCHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCC PNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYINYGMFRTDPYQLQRVEVIKGPVSVLYG CCCCCCCCCEEEEEEEEEEEEHHHHHHHCCCHHHCCCEECCHHHEEEEEEECCCEEEEEE AGSPGGLINKISKLPTEEPIREVGISYGTEDRLQGMFDFGGPIGEGKDDFLYRIVGLARR CCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC GDTNFDIADDRYFLAPSFTWKPDEGTMFTVYGLAQSDETDSNVGAITTLDGKIHELRESD CCCCCEECCCCEEECCCCEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCHHHHHHCCC PDYDDQKVRQQQVGYQFEHEFDNGLTFRQNLRYSHLNLEARYLGVTGWTGTVAHRGTNAI CCCCHHHHHHHHCCCEEEECCCCCCEEHHCCCEEEEEEEEEEEEEECCCCCHHHCCCHHH RDEMNVFQVDNQLESKFDTGPLAHTMLFGLDYTNLQSSFGYGAGAADPAFDFDIANPTYG HHCCHHEEECHHHHHHCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCC VSGATPDYSILASDADMRQVGIYALDQIEVGNWRFNLGGRQTWVNQTRDAILPAVSSEEV CCCCCCCCEEEECCCCCHHCCEEEEEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCCCC DKNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPG CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC SDILLSAIAYHIVEKNKPVLVDPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYN CHHHHHHHHHHHHCCCCCEEECHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEC HSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGLSVGAGVRYVSENWTDTANTS CCEECCCCCCCCCCCCCCHHHHHHHHHCCEECCCCCCCCEECCCCEEEECCCCCCCCCCC KNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTGTL CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHCCCCEEEECCCCCEEEE KYRW EECC >Mature Secondary Structure ARVFLNVSNNVSRIYRESLFATTAILLIGIAASPAAAQSASAGDTATTLEPIVIQGASS EEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCCCHHCCCCCCCCCCCCCEEEEECCCC DSKADRTSVTAKNSAGATKISTPLVETPRSVSVTTEKEIEQRGAQTVIEAVRYTAGVTTG CCCCCCCEEEECCCCCCCEECCCHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCC PNGFDPRFDQIYIRGFNITTVGDFRDSLRQPYINYGMFRTDPYQLQRVEVIKGPVSVLYG CCCCCCCCCEEEEEEEEEEEEHHHHHHHCCCHHHCCCEECCHHHEEEEEEECCCEEEEEE AGSPGGLINKISKLPTEEPIREVGISYGTEDRLQGMFDFGGPIGEGKDDFLYRIVGLARR CCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC GDTNFDIADDRYFLAPSFTWKPDEGTMFTVYGLAQSDETDSNVGAITTLDGKIHELRESD CCCCCEECCCCEEECCCCEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCHHHHHHCCC PDYDDQKVRQQQVGYQFEHEFDNGLTFRQNLRYSHLNLEARYLGVTGWTGTVAHRGTNAI CCCCHHHHHHHHCCCEEEECCCCCCEEHHCCCEEEEEEEEEEEEEECCCCCHHHCCCHHH RDEMNVFQVDNQLESKFDTGPLAHTMLFGLDYTNLQSSFGYGAGAADPAFDFDIANPTYG HHCCHHEEECHHHHHHCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCCCCCC VSGATPDYSILASDADMRQVGIYALDQIEVGNWRFNLGGRQTWVNQTRDAILPAVSSEEV CCCCCCCCEEEECCCCCHHCCEEEEEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCCCC DKNAFSWQAGALYLFDNGIAPFVSYATSFDPVTNRSTSGKILAPTEGEQYEVGVKYQPPG CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC SDILLSAIAYHIVEKNKPVLVDPLLFAYGSIGEVTGKGIELEARAAVADGWDLIAAYTYN CHHHHHHHHHHHHCCCCCEEECHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEC HSEVTGGGENEGNTPALTPSHVASLWANYTFQETNPFHGLSVGAGVRYVSENWTDTANTS CCEECCCCCCCCCCCCCCHHHHHHHHHCCEECCCCCCCCEECCCCEEEECCCCCCCCCCC KNPSSFYIDASAAYDFGAVDKKYEGLTAAFNIRNIADERDTVCNEGFCYLGQGRNMTGTL CCCCEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHCCCCEEEECCCCCEEEE KYRW EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]