| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is iolE [H]
Identifier: 86361176
GI number: 86361176
Start: 499432
End: 500244
Strand: Direct
Name: iolE [H]
Synonym: RHE_PF00446
Alternate gene names: 86361176
Gene position: 499432-500244 (Clockwise)
Preceding gene: 86361175
Following gene: 86361177
Centisome position: 77.73
GC content: 60.39
Gene sequence:
>813_bases ATGGCGCTCGCCGGCTATGTCGGGTGCGGCGTTGGCCATAAATATCCGACGGATCTGAAAATCTTGCGCCCCGTCCTCGA ACTCAGGGGATTGCGGATTTCCGAGCCTTGGGTGAGCACTTACTTCACCATCAAGGCGATGAATCGTCACACGCTTGAAA GCGTCGATGCTCAGCTCGACTTCCTCGAAGCCATGGAAGGCGGCAGCGACGATCCGCGCAGGGCCGATCTCGTCGTCTCC GAGTTTGGCGGAGCGGTCAATCCGCTTCCGGTCGCCCTGTTTCCCAATTGCCCCGAATTCTCCGAGGACCAGTGGAAACA GCTGATCGAAGGCCTGCATGCAGCCGGCGAGAAGGCCAAGGCCCGCAACCGCCGGCTCTGCTATCACCCGCATCTCGGAA CCGGGGTGATGAAGACGGAAGCGATCCACCGGCTCATGGACGAGACGGATCCTCGCCTAGTCCACATGCTTCTCGATACC GCACACCAGGCGGCCGCCGGCGTCGATCCGCTGGCGCTGGCCAGAAAATACGCCCACCGCATCAAGCATGTTCACCTCAA AGACATTCGCGGCGAGGTGGTTACGAACATTCACAAGGGAGAATTGTCCTTCCAGCAAGGGATCGAGGCGGGGATCTTCA CCGTGCCGGGTGACGGCTCCATCGAGACCTTTCCGGAAATCCTCGATGCGTTGGCCGAGGCGGATTTCGCCGGGTGGATC TGCATCGAGGCAGAGCAGGACCCGGCCAAGGCCAATCCGCTGCAATACGCGAAAATGGGCCGTGAATATCTGCGCAAGCT GCTTGGATGGTAG
Upstream 100 bases:
>100_bases GCCCGCTAAGGTCTGGCTCGGCGTCATCCCCACGCTCTGGTGGAATGACGATTTCATCGACATCGACATCGGCATCCCCT ACGAGCAGGCTCTGAGTGAA
Downstream 100 bases:
>100_bases CCCGGCGCCGAGCGCTTGTTTCAGCCGGATGGCGATGTGAAGGAGGCGGGAAAGGATCTCGCCTCATACAATGCCCGGCG AGACATCATCCTGAACCACG
Product: myo-inositol catabolism protein
Products: NA
Alternate protein names: 2-keto-myo-inositol dehydratase; 2KMI dehydratase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MALAGYVGCGVGHKYPTDLKILRPVLELRGLRISEPWVSTYFTIKAMNRHTLESVDAQLDFLEAMEGGSDDPRRADLVVS EFGGAVNPLPVALFPNCPEFSEDQWKQLIEGLHAAGEKAKARNRRLCYHPHLGTGVMKTEAIHRLMDETDPRLVHMLLDT AHQAAAGVDPLALARKYAHRIKHVHLKDIRGEVVTNIHKGELSFQQGIEAGIFTVPGDGSIETFPEILDALAEADFAGWI CIEAEQDPAKANPLQYAKMGREYLRKLLGW
Sequences:
>Translated_270_residues MALAGYVGCGVGHKYPTDLKILRPVLELRGLRISEPWVSTYFTIKAMNRHTLESVDAQLDFLEAMEGGSDDPRRADLVVS EFGGAVNPLPVALFPNCPEFSEDQWKQLIEGLHAAGEKAKARNRRLCYHPHLGTGVMKTEAIHRLMDETDPRLVHMLLDT AHQAAAGVDPLALARKYAHRIKHVHLKDIRGEVVTNIHKGELSFQQGIEAGIFTVPGDGSIETFPEILDALAEADFAGWI CIEAEQDPAKANPLQYAKMGREYLRKLLGW >Mature_269_residues ALAGYVGCGVGHKYPTDLKILRPVLELRGLRISEPWVSTYFTIKAMNRHTLESVDAQLDFLEAMEGGSDDPRRADLVVSE FGGAVNPLPVALFPNCPEFSEDQWKQLIEGLHAAGEKAKARNRRLCYHPHLGTGVMKTEAIHRLMDETDPRLVHMLLDTA HQAAAGVDPLALARKYAHRIKHVHLKDIRGEVVTNIHKGELSFQQGIEAGIFTVPGDGSIETFPEILDALAEADFAGWIC IEAEQDPAKANPLQYAKMGREYLRKLLGW
Specific function: Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D- (3,5/4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol) [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =4.2.1.44 [H]
Molecular weight: Translated: 29967; Mature: 29836
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAGYVGCGVGHKYPTDLKILRPVLELRGLRISEPWVSTYFTIKAMNRHTLESVDAQLD CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHH FLEAMEGGSDDPRRADLVVSEFGGAVNPLPVALFPNCPEFSEDQWKQLIEGLHAAGEKAK HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHH ARNRRLCYHPHLGTGVMKTEAIHRLMDETDPRLVHMLLDTAHQAAAGVDPLALARKYAHR HHCCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IKHVHLKDIRGEVVTNIHKGELSFQQGIEAGIFTVPGDGSIETFPEILDALAEADFAGWI HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEE CIEAEQDPAKANPLQYAKMGREYLRKLLGW EEECCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALAGYVGCGVGHKYPTDLKILRPVLELRGLRISEPWVSTYFTIKAMNRHTLESVDAQLD CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHH FLEAMEGGSDDPRRADLVVSEFGGAVNPLPVALFPNCPEFSEDQWKQLIEGLHAAGEKAK HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHH ARNRRLCYHPHLGTGVMKTEAIHRLMDETDPRLVHMLLDTAHQAAAGVDPLALARKYAHR HHCCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH IKHVHLKDIRGEVVTNIHKGELSFQQGIEAGIFTVPGDGSIETFPEILDALAEADFAGWI HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCEE CIEAEQDPAKANPLQYAKMGREYLRKLLGW EEECCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]