| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361175
Identifier: 86361175
GI number: 86361175
Start: 498783
End: 499340
Strand: Direct
Name: 86361175
Synonym: RHE_PF00445
Alternate gene names: NA
Gene position: 498783-499340 (Clockwise)
Preceding gene: 86361174
Following gene: 86361176
Centisome position: 77.63
GC content: 61.65
Gene sequence:
>558_bases ATGAGCAGCCGTTTCGAGCCATTTCTGGGTCTTTCCGTCGAATTGACGGCCTTCTCCTACTTCGATCTTCTGGGAACCGG CTTGGCAGAACGCTATCTCGCCACGCTCGACACGGTGGTCGGCAGCGAGATCACCGACGCACTGCTGGCCGCTTTCACCG CCCTGCCACCCCCGGAAAGCGAGGCCCGTATCCGCGCCATGCGCACGACCATTCTCGGCAATGAATTGCTGGGAGAGGTG GCCCGCGCGCTGATCAAGCTCTGGTATTCCGGCACCTGGTTCGAGCTGTCCACCGCCTGGACGGAGCGCTTTGGCCCCAG GCCTGCGAATACCACCTTCGTCGTTTCTCCCGATGCTTATATCGAGGGTCTGCTCTGGAAGGCGATCGGAGCCCACCCTG CGGGCGCCAAGGGGCAGGGTTTCGGCTCCTGGGCCTTTCCGCCGAAAATTCCGGCTCACGCGCCCGTTCCGAGACCTGCC CTGACGCCAATTCCGCTTGTCCTCAAAGAACTGGATCAACGCCATGACGAATTATCTGCATCGACTGACGCCCGCTAA
Upstream 100 bases:
>100_bases ATCCGCTGCCAAAGCATCCCGGTAAGAACGGCAGCCCCACCTATGAGATCCCCGGCGGTATCAAACAGCCAGTCGTCACC CGGCAGGCGGAGGTGAACGC
Downstream 100 bases:
>100_bases GGTCTGGCTCGGCGTCATCCCCACGCTCTGGTGGAATGACGATTTCATCGACATCGACATCGGCATCCCCTACGAGCAGG CTCTGAGTGAAATGGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSSRFEPFLGLSVELTAFSYFDLLGTGLAERYLATLDTVVGSEITDALLAAFTALPPPESEARIRAMRTTILGNELLGEV ARALIKLWYSGTWFELSTAWTERFGPRPANTTFVVSPDAYIEGLLWKAIGAHPAGAKGQGFGSWAFPPKIPAHAPVPRPA LTPIPLVLKELDQRHDELSASTDAR
Sequences:
>Translated_185_residues MSSRFEPFLGLSVELTAFSYFDLLGTGLAERYLATLDTVVGSEITDALLAAFTALPPPESEARIRAMRTTILGNELLGEV ARALIKLWYSGTWFELSTAWTERFGPRPANTTFVVSPDAYIEGLLWKAIGAHPAGAKGQGFGSWAFPPKIPAHAPVPRPA LTPIPLVLKELDQRHDELSASTDAR >Mature_184_residues SSRFEPFLGLSVELTAFSYFDLLGTGLAERYLATLDTVVGSEITDALLAAFTALPPPESEARIRAMRTTILGNELLGEVA RALIKLWYSGTWFELSTAWTERFGPRPANTTFVVSPDAYIEGLLWKAIGAHPAGAKGQGFGSWAFPPKIPAHAPVPRPAL TPIPLVLKELDQRHDELSASTDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20109; Mature: 19978
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRFEPFLGLSVELTAFSYFDLLGTGLAERYLATLDTVVGSEITDALLAAFTALPPPES CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EARIRAMRTTILGNELLGEVARALIKLWYSGTWFELSTAWTERFGPRPANTTFVVSPDAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCEEEECCHHH IEGLLWKAIGAHPAGAKGQGFGSWAFPPKIPAHAPVPRPALTPIPLVLKELDQRHDELSA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC STDAR CCCCC >Mature Secondary Structure SSRFEPFLGLSVELTAFSYFDLLGTGLAERYLATLDTVVGSEITDALLAAFTALPPPES CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EARIRAMRTTILGNELLGEVARALIKLWYSGTWFELSTAWTERFGPRPANTTFVVSPDAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCEEEECCHHH IEGLLWKAIGAHPAGAKGQGFGSWAFPPKIPAHAPVPRPALTPIPLVLKELDQRHDELSA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC STDAR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA