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The map label for this gene is dadR

Identifier: 86361168

GI number: 86361168

Start: 491401

End: 491865

Strand: Direct

Name: dadR

Synonym: RHE_PF00438

Alternate gene names: 86361168

Gene position: 491401-491865 (Clockwise)

Preceding gene: 86361164

Following gene: 86361171

Centisome position: 76.48

GC content: 60.0

Gene sequence:

>465_bases
ATGCCCGCCCTCGACACGCTCGACCGCAATATCCTCAGGCTGTTGCGTCTTGACGCGCGTATGAGCAACGCCAAACTCGC
CGCCGAGATCGGCCTTTCGCCGTCGGCCTGCCTCAGACGCATCAAGATCATGGAAAAATCAGGCGTCATCCGCGGCTATA
CGGCGCTGGTGGATACCGGCAATGCGGATGACATGATCGCCGTGATTATCAACATCACCCTCGAACGGCAGACGGAGGAT
CATCTCGATCGCTTCGAAGCGGCGGTGCGTCGGCATCCGGAAATCCGCGAATGTTTTCTGATGACGGGCGGATCTGACTA
CCTGCTGCGCGTGGAGGTTGCCAGTGCGGGCGAGTTCGAACGGATTCACAAGGAGATATTGTCGACCTTGCCCGGCGTCC
TCCGGATTCATTCCAGCTTCTCGATCCGCAATGTTCTGGCGACGCGCACGCGGGGGAGGCGCTGA

Upstream 100 bases:

>100_bases
CTTATGAAATAATGAGCGAAATTGCCGACGATCTTGTCGCTTATTATTGCGCATACTGCATATAATTCGCATAATTAGCC
GAGATGTGAAGGAAACCGTC

Downstream 100 bases:

>100_bases
ACCGCCATCCGCTTAGCCTAGATCAACTCCAGCGCAGTGGCCTTGGCGACCGCCTCGCTCGTGGTGGCAACGGTCAGCTT
CCGGCGCGCCGAGGCGAGAT

Product: alanine catabolic operon transcription regulator

Products: NA

Alternate protein names: ORF-1 [H]

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPALDTLDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTALVDTGNADDMIAVIINITLERQTED
HLDRFEAAVRRHPEIRECFLMTGGSDYLLRVEVASAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR

Sequences:

>Translated_154_residues
MPALDTLDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTALVDTGNADDMIAVIINITLERQTED
HLDRFEAAVRRHPEIRECFLMTGGSDYLLRVEVASAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR
>Mature_153_residues
PALDTLDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTALVDTGNADDMIAVIINITLERQTEDH
LDRFEAAVRRHPEIRECFLMTGGSDYLLRVEVASAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR

Specific function: Not known, symbiotically active [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=130, Percent_Identity=42.3076923076923, Blast_Score=112, Evalue=9e-27,
Organism=Escherichia coli, GI87081742, Length=147, Percent_Identity=29.2517006802721, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17340; Mature: 17209

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALDTLDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTALVDTG
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEHEEEEECC
NADDMIAVIINITLERQTEDHLDRFEAAVRRHPEIRECFLMTGGSDYLLRVEVASAGEFE
CCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEEECCCCCHH
RIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR
HHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PALDTLDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTALVDTG
CCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEHEEEEECC
NADDMIAVIINITLERQTEDHLDRFEAAVRRHPEIRECFLMTGGSDYLLRVEVASAGEFE
CCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEEECCCCCHH
RIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR
HHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8190622; 9163424 [H]