| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is ygjG [C]
Identifier: 86361164
GI number: 86361164
Start: 486351
End: 487685
Strand: Direct
Name: ygjG [C]
Synonym: RHE_PF00434
Alternate gene names: 86361164
Gene position: 486351-487685 (Clockwise)
Preceding gene: 86361162
Following gene: 86361168
Centisome position: 75.69
GC content: 63.75
Gene sequence:
>1335_bases ATGGACCAGATCAGCAAGACGAATGCGCCCGTACTCGAAAATTTCTGGATGCCGTTCACCGCCAACCGGCAATTCAAGGC CGCGCCGCGCCTGCTGGCCGCTGCCGAAGGGATGTATTACACCGACGTCGATGGAAACCGGGTGCTGGACGGCACGGCCG GGCTCTGGTGCTGCAACGCCGGCCACGGCCGCAGGAAGATCGCCCAGGCGGTCGAGCGGCAGCTTGCCACGCTCGACTAT GCGCCGACCTTCCAGATGGGGCATCCGATCGCCTTCGACTTCGCCGCCAAGCTCGCTGCGAACGCACCGGGCGGCGCTAA CGCCAAGCTCGACAGGGTCTTCTTCACCGGCTCGGGCTCGGAATCGGTCGACACGGCTCTGAAGATCGCCATCGCCTACC AGCGCGCCATCGGCCAGGGCACCCGCACTCGGATCATCGGCCGTGAAAAAGGCTATCACGGCGTCGGCTTCGGCGGCATT TCCGTCGGTGGCCTCGTCAACAATCGGCGGGTCTTCCCGCAGATCCCGGCCGATCACATGCGCCATACGCTGGATATCGG GCGCAATGCCTTTTCAAAGGGGCTTCCCACGCATGGCGTCGAACTGGCCGACGATCTCGAACGCCTGGTGCAGTTGCACG GCGCCGAAACCATCGCCGCTGTCATCGTCGAGCCGATGTCGGGATCGGCGGGTGTTGTCCTGCCGCCGAAGGGATATCTG GAAAGGCTGCGCGCGACCGCCGACAAGTACGGCATCCTGCTGATTTTTGACGAAGTCATCACCGGCTTCGGTCGTCTCGG CACACCTTTCGCGGTCGACTATTTCGGCGTCGTTCCCGATCTGGTCACCACGGCGAAGGGCCTGACGAACGGCGCCGTAC CCATGGGCGCGGTCTTTGCCAGCCGTAAGGTCCATGACGGACTTATGGTCGGACCCGATACTGCGATCGAACTCTTCCAC GGCTACACCTATTCCGGCCATCCGGTCGCTTGCGCCGCAGGGCTCGCCACCCTCGAAATCTACGAGGAAGAAGGGCTGCT GACGCGTGCATCCGACCTGGCCGAATATTGGCAGGACGCCCTGCACTCATTGAAGGGCCTCGCGCACGTCGTTGACATCC GCAATCTCGGCCTGGTCGGCGCGATCGAACTGGCGCCGCGTGACGGTGCTGCCGGAAAGCGCGCCTACGATGTCTTCGTC GACTGCTTCAACAAGGGGCTGCTGATCCGCGTGACCGGCGACATCATCGCTCTGTCTCCACCGCTGATCATCGAGAAGGA GCAGATCGACACGCTCGTCTCGACGCTTGGGGAGGCCCTGAAACGCGCGGCCTAG
Upstream 100 bases:
>100_bases TTCTTCATTGTTCAATTTCAATAACTTGCATCACCGAAGAAAAGGACTTGTTTGAAAGATTGAAATTGCCATTCTCCAGG CGATTTCAAAGGAGGCCAGG
Downstream 100 bases:
>100_bases AGCATTTGCCGTCGGCGATCGGACGCTCGGTCCGTCGCCGATGGAACCGTCTGGGACGCCGAGGCGGAGTTCAGCGCTTC AGCGTCTGCGACGGCAGCTC
Product: beta alanine--pyruvate transaminase
Products: NA
Alternate protein names: Omega-APT; Beta-alanine--pyruvate aminotransferase [H]
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MDQISKTNAPVLENFWMPFTANRQFKAAPRLLAAAEGMYYTDVDGNRVLDGTAGLWCCNAGHGRRKIAQAVERQLATLDY APTFQMGHPIAFDFAAKLAANAPGGANAKLDRVFFTGSGSESVDTALKIAIAYQRAIGQGTRTRIIGREKGYHGVGFGGI SVGGLVNNRRVFPQIPADHMRHTLDIGRNAFSKGLPTHGVELADDLERLVQLHGAETIAAVIVEPMSGSAGVVLPPKGYL ERLRATADKYGILLIFDEVITGFGRLGTPFAVDYFGVVPDLVTTAKGLTNGAVPMGAVFASRKVHDGLMVGPDTAIELFH GYTYSGHPVACAAGLATLEIYEEEGLLTRASDLAEYWQDALHSLKGLAHVVDIRNLGLVGAIELAPRDGAAGKRAYDVFV DCFNKGLLIRVTGDIIALSPPLIIEKEQIDTLVSTLGEALKRAA
Sequences:
>Translated_444_residues MDQISKTNAPVLENFWMPFTANRQFKAAPRLLAAAEGMYYTDVDGNRVLDGTAGLWCCNAGHGRRKIAQAVERQLATLDY APTFQMGHPIAFDFAAKLAANAPGGANAKLDRVFFTGSGSESVDTALKIAIAYQRAIGQGTRTRIIGREKGYHGVGFGGI SVGGLVNNRRVFPQIPADHMRHTLDIGRNAFSKGLPTHGVELADDLERLVQLHGAETIAAVIVEPMSGSAGVVLPPKGYL ERLRATADKYGILLIFDEVITGFGRLGTPFAVDYFGVVPDLVTTAKGLTNGAVPMGAVFASRKVHDGLMVGPDTAIELFH GYTYSGHPVACAAGLATLEIYEEEGLLTRASDLAEYWQDALHSLKGLAHVVDIRNLGLVGAIELAPRDGAAGKRAYDVFV DCFNKGLLIRVTGDIIALSPPLIIEKEQIDTLVSTLGEALKRAA >Mature_444_residues MDQISKTNAPVLENFWMPFTANRQFKAAPRLLAAAEGMYYTDVDGNRVLDGTAGLWCCNAGHGRRKIAQAVERQLATLDY APTFQMGHPIAFDFAAKLAANAPGGANAKLDRVFFTGSGSESVDTALKIAIAYQRAIGQGTRTRIIGREKGYHGVGFGGI SVGGLVNNRRVFPQIPADHMRHTLDIGRNAFSKGLPTHGVELADDLERLVQLHGAETIAAVIVEPMSGSAGVVLPPKGYL ERLRATADKYGILLIFDEVITGFGRLGTPFAVDYFGVVPDLVTTAKGLTNGAVPMGAVFASRKVHDGLMVGPDTAIELFH GYTYSGHPVACAAGLATLEIYEEEGLLTRASDLAEYWQDALHSLKGLAHVVDIRNLGLVGAIELAPRDGAAGKRAYDVFV DCFNKGLLIRVTGDIIALSPPLIIEKEQIDTLVSTLGEALKRAA
Specific function: Catalyzes transamination between a variety of omega- amino acids, mono and diamines, and pyruvate. Plays a pivotal role in the metabolism of the omega amino acids [H]
COG id: COG0161
COG function: function code H; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI13994255, Length=442, Percent_Identity=28.9592760180996, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI37574042, Length=435, Percent_Identity=26.6666666666667, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI226442705, Length=435, Percent_Identity=26.8965517241379, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI4557809, Length=425, Percent_Identity=26.5882352941176, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI226442709, Length=399, Percent_Identity=27.0676691729323, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI284507298, Length=256, Percent_Identity=32.03125, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI24119277, Length=453, Percent_Identity=26.0485651214128, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI145693181, Length=409, Percent_Identity=32.518337408313, Blast_Score=172, Evalue=5e-44, Organism=Escherichia coli, GI1786991, Length=439, Percent_Identity=30.751708428246, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1789016, Length=420, Percent_Identity=30, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1787560, Length=441, Percent_Identity=29.7052154195011, Blast_Score=141, Evalue=7e-35, Organism=Escherichia coli, GI1788044, Length=428, Percent_Identity=28.7383177570093, Blast_Score=136, Evalue=2e-33, Organism=Escherichia coli, GI1789759, Length=444, Percent_Identity=26.8018018018018, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1786349, Length=346, Percent_Identity=30.0578034682081, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI32564660, Length=442, Percent_Identity=30.7692307692308, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI25144271, Length=432, Percent_Identity=28.4722222222222, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI71992977, Length=441, Percent_Identity=27.2108843537415, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI25144274, Length=235, Percent_Identity=35.3191489361702, Blast_Score=122, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6323470, Length=437, Percent_Identity=28.1464530892449, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6324386, Length=481, Percent_Identity=26.1954261954262, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6324432, Length=408, Percent_Identity=26.9607843137255, Blast_Score=116, Evalue=7e-27, Organism=Drosophila melanogaster, GI161085790, Length=442, Percent_Identity=28.9592760180996, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI21357415, Length=420, Percent_Identity=29.0476190476191, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI28574759, Length=445, Percent_Identity=28.5393258426966, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI21356575, Length=454, Percent_Identity=27.5330396475771, Blast_Score=134, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.18 [H]
Molecular weight: Translated: 47439; Mature: 47439
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQISKTNAPVLENFWMPFTANRQFKAAPRLLAAAEGMYYTDVDGNRVLDGTAGLWCCNA CCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCEEEECCCCEEEECC GHGRRKIAQAVERQLATLDYAPTFQMGHPIAFDFAAKLAANAPGGANAKLDRVFFTGSGS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCC ESVDTALKIAIAYQRAIGQGTRTRIIGREKGYHGVGFGGISVGGLVNNRRVFPQIPADHM CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCEECCCEECCCCCHHHH RHTLDIGRNAFSKGLPTHGVELADDLERLVQLHGAETIAAVIVEPMSGSAGVVLPPKGYL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCHHHH ERLRATADKYGILLIFDEVITGFGRLGTPFAVDYFGVVPDLVTTAKGLTNGAVPMGAVFA HHHHHHHHHCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH SRKVHDGLMVGPDTAIELFHGYTYSGHPVACAAGLATLEIYEEEGLLTRASDLAEYWQDA HHHHCCCEEECCCHHHHHHHCCCCCCCCHHHHHCHHEEEEECCCCCHHHHHHHHHHHHHH LHSLKGLAHVVDIRNLGLVGAIELAPRDGAAGKRAYDVFVDCFNKGLLIRVTGDIIALSP HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEECC PLIIEKEQIDTLVSTLGEALKRAA CCEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDQISKTNAPVLENFWMPFTANRQFKAAPRLLAAAEGMYYTDVDGNRVLDGTAGLWCCNA CCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCEEEECCCCEEEECC GHGRRKIAQAVERQLATLDYAPTFQMGHPIAFDFAAKLAANAPGGANAKLDRVFFTGSGS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCC ESVDTALKIAIAYQRAIGQGTRTRIIGREKGYHGVGFGGISVGGLVNNRRVFPQIPADHM CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCEECCCEECCCCCHHHH RHTLDIGRNAFSKGLPTHGVELADDLERLVQLHGAETIAAVIVEPMSGSAGVVLPPKGYL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCHHHH ERLRATADKYGILLIFDEVITGFGRLGTPFAVDYFGVVPDLVTTAKGLTNGAVPMGAVFA HHHHHHHHHCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH SRKVHDGLMVGPDTAIELFHGYTYSGHPVACAAGLATLEIYEEEGLLTRASDLAEYWQDA HHHHCCCEEECCCHHHHHHHCCCCCCCCHHHHHCHHEEEEECCCCCHHHHHHHHHHHHHH LHSLKGLAHVVDIRNLGLVGAIELAPRDGAAGKRAYDVFVDCFNKGLLIRVTGDIIALSP HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEECC PLIIEKEQIDTLVSTLGEALKRAA CCEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1618757; 6822556; 2500426 [H]