| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361161
Identifier: 86361161
GI number: 86361161
Start: 483654
End: 484100
Strand: Direct
Name: 86361161
Synonym: RHE_PF00431
Alternate gene names: NA
Gene position: 483654-484100 (Clockwise)
Preceding gene: 86361160
Following gene: 86361162
Centisome position: 75.27
GC content: 60.63
Gene sequence:
>447_bases ATGCACCCTAAGCGAATATCCCTTACCGTCCTTTTCACAGTCGCCGCGATTTTGGGCCAGGCGATTTTAGCCCGCGCCGA ACCGGTGGAGCGACCGCCCATTTCCGCCATTATTCTCTCCGTCTCACCTCGGACCGTCCGTTGGGCCACCGTCCACACGG CTCCCGATCCCGGGGAAGACGATCCCTATTACCACGTCGAGGTGATCGAGAAGGAGCGACGCACGCCGCCATGGCAATTC AAACGGCTTGCCACCCATGTCGTGGTCACGGCCGATGCGTTGAACAGGAGCCGCTCGCGACAGAAAGCCAGGACCTATTT TTACAAAGATATCGAATTCCGGATCGCCTACCAGAACTGGCGCGCCCAGCCTCGACCACAGCGGGAGGCGGGTGTTTGCC GCACCACGATCCTGGAATGCGTCGGCGTCGCCGACAAGCCTGACTGA
Upstream 100 bases:
>100_bases AGGTTCTCTCCGACGTTGACAAGAAGGGCGGCCTCGCTGCGCTGACCGCGGCACTCGACGGTGTGCTCGCCCGCATCGAG GGCCGCAGCGACTGAAGCGC
Downstream 100 bases:
>100_bases TTTCCGCTCCACCATCAAAAATCGCGGTTGCAATAATTGAAGAAATGCAATTTAGCTCTGACGATGAGTCACGAAACTAC TTTTGCTAGAGAAAATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MHPKRISLTVLFTVAAILGQAILARAEPVERPPISAIILSVSPRTVRWATVHTAPDPGEDDPYYHVEVIEKERRTPPWQF KRLATHVVVTADALNRSRSRQKARTYFYKDIEFRIAYQNWRAQPRPQREAGVCRTTILECVGVADKPD
Sequences:
>Translated_148_residues MHPKRISLTVLFTVAAILGQAILARAEPVERPPISAIILSVSPRTVRWATVHTAPDPGEDDPYYHVEVIEKERRTPPWQF KRLATHVVVTADALNRSRSRQKARTYFYKDIEFRIAYQNWRAQPRPQREAGVCRTTILECVGVADKPD >Mature_148_residues MHPKRISLTVLFTVAAILGQAILARAEPVERPPISAIILSVSPRTVRWATVHTAPDPGEDDPYYHVEVIEKERRTPPWQF KRLATHVVVTADALNRSRSRQKARTYFYKDIEFRIAYQNWRAQPRPQREAGVCRTTILECVGVADKPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16944; Mature: 16944
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPKRISLTVLFTVAAILGQAILARAEPVERPPISAIILSVSPRTVRWATVHTAPDPGED CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCC DPYYHVEVIEKERRTPPWQFKRLATHVVVTADALNRSRSRQKARTYFYKDIEFRIAYQNW CCEEEEEEEEHHCCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHEECEEEEEEECCC RAQPRPQREAGVCRTTILECVGVADKPD CCCCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHPKRISLTVLFTVAAILGQAILARAEPVERPPISAIILSVSPRTVRWATVHTAPDPGED CCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCC DPYYHVEVIEKERRTPPWQFKRLATHVVVTADALNRSRSRQKARTYFYKDIEFRIAYQNW CCEEEEEEEEHHCCCCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHEECEEEEEEECCC RAQPRPQREAGVCRTTILECVGVADKPD CCCCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA