Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

Click here to switch to the map view.

The map label for this gene is 86361162

Identifier: 86361162

GI number: 86361162

Start: 484386

End: 485573

Strand: Direct

Name: 86361162

Synonym: RHE_PF00432

Alternate gene names: NA

Gene position: 484386-485573 (Clockwise)

Preceding gene: 86361161

Following gene: 86361164

Centisome position: 75.39

GC content: 60.94

Gene sequence:

>1188_bases
ATGAAGCCTATGCGCAATTTCCGCCTGATGATGGCAAGCACCGCGTTCCTGACGCTGGCCGGCCCGGCGCTCGCCCTCGA
CGGCGCCGATATGATGAAAAAGCTCAGCGCCGCGACCAATGCCGGCGGCACGGTCATCACCTTCGAGAAGGCCGAAGTCG
ACGGCGACACGGTGACGGCAACAGGCGTCCAGGTGGGATTTGCGAACCTGCCCGGCGACCCGCTGAAGATCGGCGACCTC
ACCTTCGAGGGCGTCGAGGAAAAAGAAGGCGGCGCCTATTACGCCAAGACCCTTTCCTTCCCGGATGTCGATATCAGCCA
GGAAGGAGGACGCTTTTCCGCCAAGGAGATTCTGTTCACCGGCCTGACGATTCCCGCCAATGCGACCGGCGAGACGCTGG
ACGACATCCTTCTCTATGAGAACGCCAGCGTTGGGCCGATCGCCCTCAACATCAAGGGCAAGGACGTGCTTGCGATCGAC
GGTATCGAGGCAAACATGGGACGCCAGGACGGCGGCTTTGCCTATGACGCCAATGTCGCCGGCTTCAAGGCCGACCTGTC
GCAGGTCGAGGACGCGGCTGCGAAGGAGGCCATTGAGAAGCTCGGACTGACGACGCTCGACGGCACTATGACGATGAAGG
GAAGCTGGGAAGTCGAAAGCGGCAAGGTTGTCCTCGACGAATATGCTTTCGATTTCAAGAATGTCGGCCGGCTGAACTTC
GCCGTGGACTTCTCGGGTTATACGCTCGGCTTCATCAAATCGCTGCAGGAGGCGGTCAAGACAGCCGAAGCCAATCCGAA
CAAGGAAGAGGCCAACCAGGCCGCCGGACTTGCGATGATGGGCCTGATGCAGCAGCTGACGTTCAATAGCGCCTCGATCC
GCTTCGACGATGCCTCGATCACCAAAAAGGCGCTCGACTATGCCGGCGCGAAGCAGGGCGTCACGGGCGACGAGCTGGCG
CAATCGCTGAAGGCGCTGGTTCCGATGATGATGGCGCAACTCAACATGCCGGAACTGCAAAACCAGATATCGGCGGCCCT
CAACACCTATCTCGACGGGCCGAAGAGCCTGACGATCAGCGCCGCCCCGGAAAAGCCGGTTCCGGTGCCGATGATTGTCG
GTGCTGCCATGGGCGCGCCGAACACCATTCCTACGGTGCTCGGCGTCAAGGTATCGGCGAACGACTAA

Upstream 100 bases:

>100_bases
GATCTGACGAACCGTGACGTCCCGGCCGCTCTGCGAGCAGGCGCGGCGGGGCATATTCCATGAATTTCCCCGCATCCACT
TTCCACACAAGGACATCTCC

Downstream 100 bases:

>100_bases
GTCAAGATCAACCGCCGAAGGCGGATCCTTACCGATCCGCCTCGGGATCATCCTTCCGAAAACACTGCACGCATTCTGAA
ATTGCGTTAAAAGGTCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MKPMRNFRLMMASTAFLTLAGPALALDGADMMKKLSAATNAGGTVITFEKAEVDGDTVTATGVQVGFANLPGDPLKIGDL
TFEGVEEKEGGAYYAKTLSFPDVDISQEGGRFSAKEILFTGLTIPANATGETLDDILLYENASVGPIALNIKGKDVLAID
GIEANMGRQDGGFAYDANVAGFKADLSQVEDAAAKEAIEKLGLTTLDGTMTMKGSWEVESGKVVLDEYAFDFKNVGRLNF
AVDFSGYTLGFIKSLQEAVKTAEANPNKEEANQAAGLAMMGLMQQLTFNSASIRFDDASITKKALDYAGAKQGVTGDELA
QSLKALVPMMMAQLNMPELQNQISAALNTYLDGPKSLTISAAPEKPVPVPMIVGAAMGAPNTIPTVLGVKVSAND

Sequences:

>Translated_395_residues
MKPMRNFRLMMASTAFLTLAGPALALDGADMMKKLSAATNAGGTVITFEKAEVDGDTVTATGVQVGFANLPGDPLKIGDL
TFEGVEEKEGGAYYAKTLSFPDVDISQEGGRFSAKEILFTGLTIPANATGETLDDILLYENASVGPIALNIKGKDVLAID
GIEANMGRQDGGFAYDANVAGFKADLSQVEDAAAKEAIEKLGLTTLDGTMTMKGSWEVESGKVVLDEYAFDFKNVGRLNF
AVDFSGYTLGFIKSLQEAVKTAEANPNKEEANQAAGLAMMGLMQQLTFNSASIRFDDASITKKALDYAGAKQGVTGDELA
QSLKALVPMMMAQLNMPELQNQISAALNTYLDGPKSLTISAAPEKPVPVPMIVGAAMGAPNTIPTVLGVKVSAND
>Mature_395_residues
MKPMRNFRLMMASTAFLTLAGPALALDGADMMKKLSAATNAGGTVITFEKAEVDGDTVTATGVQVGFANLPGDPLKIGDL
TFEGVEEKEGGAYYAKTLSFPDVDISQEGGRFSAKEILFTGLTIPANATGETLDDILLYENASVGPIALNIKGKDVLAID
GIEANMGRQDGGFAYDANVAGFKADLSQVEDAAAKEAIEKLGLTTLDGTMTMKGSWEVESGKVVLDEYAFDFKNVGRLNF
AVDFSGYTLGFIKSLQEAVKTAEANPNKEEANQAAGLAMMGLMQQLTFNSASIRFDDASITKKALDYAGAKQGVTGDELA
QSLKALVPMMMAQLNMPELQNQISAALNTYLDGPKSLTISAAPEKPVPVPMIVGAAMGAPNTIPTVLGVKVSAND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41482; Mature: 41482

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPMRNFRLMMASTAFLTLAGPALALDGADMMKKLSAATNAGGTVITFEKAEVDGDTVTA
CCCHHHHHHHHHHHEEEEECCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEE
TGVQVGFANLPGDPLKIGDLTFEGVEEKEGGAYYAKTLSFPDVDISQEGGRFSAKEILFT
EEEEEEECCCCCCCEEECCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHEEEE
GLTIPANATGETLDDILLYENASVGPIALNIKGKDVLAIDGIEANMGRQDGGFAYDANVA
CEECCCCCCCCCHHHEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCC
GFKADLSQVEDAAAKEAIEKLGLTTLDGTMTMKGSWEVESGKVVLDEYAFDFKNVGRLNF
CHHHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEEEHHCCHHCCCEEEE
AVDFSGYTLGFIKSLQEAVKTAEANPNKEEANQAAGLAMMGLMQQLTFNSASIRFDDASI
EEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH
TKKALDYAGAKQGVTGDELAQSLKALVPMMMAQLNMPELQNQISAALNTYLDGPKSLTIS
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEE
AAPEKPVPVPMIVGAAMGAPNTIPTVLGVKVSAND
CCCCCCCCCHHEEHHHCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MKPMRNFRLMMASTAFLTLAGPALALDGADMMKKLSAATNAGGTVITFEKAEVDGDTVTA
CCCHHHHHHHHHHHEEEEECCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEE
TGVQVGFANLPGDPLKIGDLTFEGVEEKEGGAYYAKTLSFPDVDISQEGGRFSAKEILFT
EEEEEEECCCCCCCEEECCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHEEEE
GLTIPANATGETLDDILLYENASVGPIALNIKGKDVLAIDGIEANMGRQDGGFAYDANVA
CEECCCCCCCCCHHHEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCC
GFKADLSQVEDAAAKEAIEKLGLTTLDGTMTMKGSWEVESGKVVLDEYAFDFKNVGRLNF
CHHHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEEEHHCCHHCCCEEEE
AVDFSGYTLGFIKSLQEAVKTAEANPNKEEANQAAGLAMMGLMQQLTFNSASIRFDDASI
EEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH
TKKALDYAGAKQGVTGDELAQSLKALVPMMMAQLNMPELQNQISAALNTYLDGPKSLTIS
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEE
AAPEKPVPVPMIVGAAMGAPNTIPTVLGVKVSAND
CCCCCCCCCHHEEHHHCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA