| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is 86361143
Identifier: 86361143
GI number: 86361143
Start: 466608
End: 467021
Strand: Reverse
Name: 86361143
Synonym: RHE_PF00413
Alternate gene names: NA
Gene position: 467021-466608 (Counterclockwise)
Preceding gene: 86361145
Following gene: 86361137
Centisome position: 72.69
GC content: 59.66
Gene sequence:
>414_bases ATGGCTGGGCGCTGTTTTCCGTCATACTTTCCCCCTTTATTTCATCTGCCGCCGGACACGGCGGGATGCCTCGGCCGCAT CGTCGGCGTGGGCGTCGCCGAGCTCATCTTTCTCCTCGCGCCTTTCAGGATCCGATGCAGGGCATCATGGACGAGGCGTG GCCGTATATTAGCGAACAAGAGGCGAAAGCGCAGTAAGGCGGCAGCGAAGCGGGCAGATTTCAAGGTGATGCGGGCGTCG GTACCGCTGGATAACGCAAGCCGGTCCGGGCCGAGCCTGAGCATGGCCGGCGTCCGAAATACAAACCTTTTAAATGCCTT ATCTAAAAATCCCATCTGGCGGATCTTCCTAGCCGGTCGGCAGGAACTGACAGAAGCGGCAGCACTTGGCAAGGTCGCGG GGCTGCTGCTTTGA
Upstream 100 bases:
>100_bases TCCTTGGCGCGGCCGACAGGCTCGGCATCAAACGCGCCGAAAGCGCCGCCGAGGGTTTCCACCATATTGTCGAAAGACGA ACCGTGGAATCGGAAGGAGA
Downstream 100 bases:
>100_bases TGGTAGTCCGGTGATGAAACGTTTAGCCATCCTGCGCAGATGGCGCGTTGGGGTGCGCCATCCGAAAGTCGCCTGCCGAA GGTTCTAAAGTGGACCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAGRCFPSYFPPLFHLPPDTAGCLGRIVGVGVAELIFLLAPFRIRCRASWTRRGRILANKRRKRSKAAAKRADFKVMRAS VPLDNASRSGPSLSMAGVRNTNLLNALSKNPIWRIFLAGRQELTEAAALGKVAGLLL
Sequences:
>Translated_137_residues MAGRCFPSYFPPLFHLPPDTAGCLGRIVGVGVAELIFLLAPFRIRCRASWTRRGRILANKRRKRSKAAAKRADFKVMRAS VPLDNASRSGPSLSMAGVRNTNLLNALSKNPIWRIFLAGRQELTEAAALGKVAGLLL >Mature_136_residues AGRCFPSYFPPLFHLPPDTAGCLGRIVGVGVAELIFLLAPFRIRCRASWTRRGRILANKRRKRSKAAAKRADFKVMRASV PLDNASRSGPSLSMAGVRNTNLLNALSKNPIWRIFLAGRQELTEAAALGKVAGLLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14972; Mature: 14841
Theoretical pI: Translated: 12.26; Mature: 12.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRCFPSYFPPLFHLPPDTAGCLGRIVGVGVAELIFLLAPFRIRCRASWTRRGRILANK CCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH RRKRSKAAAKRADFKVMRASVPLDNASRSGPSLSMAGVRNTNLLNALSKNPIWRIFLAGR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCEEEEEECCH QELTEAAALGKVAGLLL HHHHHHHHHHHHHHHCC >Mature Secondary Structure AGRCFPSYFPPLFHLPPDTAGCLGRIVGVGVAELIFLLAPFRIRCRASWTRRGRILANK CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH RRKRSKAAAKRADFKVMRASVPLDNASRSGPSLSMAGVRNTNLLNALSKNPIWRIFLAGR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCEEEEEECCH QELTEAAALGKVAGLLL HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA