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The map label for this gene is etfBf

Identifier: 86361135

GI number: 86361135

Start: 457587

End: 458336

Strand: Reverse

Name: etfBf

Synonym: RHE_PF00405

Alternate gene names: 86361135

Gene position: 458336-457587 (Counterclockwise)

Preceding gene: 86361136

Following gene: 86361134

Centisome position: 71.33

GC content: 62.67

Gene sequence:

>750_bases
ATGAAGATTCTCGTGCCCGTCAAGCGGGTTGTCGACTACAACGTGAAGATCCGGGTTAAGCCGGATGGCACGGGTGTCGA
GCTTGCCAATGTGAAGATGTCGATGAACCCGTTCGACGAGATCTCGGTGGAAGAGGCGCTGCGATTGAAGGAGGCCGGCA
AGGCCGAGGAAGTGGTGGTGGTCTCGATCGGCCCTGCCAAGGCCGAGGAGACGCTGAGGACGGCACTCGCCATGGGCGCC
GACCGGGCGATCCTGGTCGAGACCGACGATCAAGTCGAGCCGCTCGCCGTCGCCAAGATCCTCAAAGGTGTCGCCGATGC
CGAGCAGCCGGGGCTGATCATATCAGGCAAGCAGGCGATCGACGACGACAGCAATCAGACCGGCCAGATGCTGGCGGCAT
TGCTGGGTTCGGCCCAGGCGACCTTCGCCTCGAAGATCGAGATCGGTGACGGCAAAGCTCAGGTGACCCGCGAGGTCGAT
GGCGGCCTGCAGACGATCGAGATCAAGCTGCCGGCGGTCATCACCACCGACCTGCGTCTCAACGAGCCGCGTTATGCCTC
GCTGCCGAACATCATGAAGGCGAAGAAGAAGCCGCTCGACAAGAAGACGCCTGCCGATTTCGGCGTCGACACGACGCCGC
GGCTGAAGGTGCTGAAGACCGAGGAGCCCAGTGGCCGCAAGGCCGGCGTCAAGGTCAAGTCGGTCGCCGAACTGGTCGAC
AAGCTGAAGAACGAAGCCGGCGTGCTGTAA

Upstream 100 bases:

>100_bases
AGCTGGGCGGCGGTTGCGACAGCGGCTTACGACAAAAACAGTTGAAGCGCGGACCAAGCGAATCTGAAAGATCGCGGCGC
TTTGGATGAAGGGGTTTGCC

Downstream 100 bases:

>100_bases
TCGGGTTGGAACAGGAGCAACTATCATGACCATTCTTCTTCTGGCCGACCATGACGGCAATCATCTCTCCGACCAGACCG
CCAAGGCGCTGACGGCAGCC

Product: electron transport flavoprotein, beta subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDQVEPLAVAKILKGVADAEQPGLIISGKQAIDDDSNQTGQMLAALLGSAQATFASKIEIGDGKAQVTREVD
GGLQTIEIKLPAVITTDLRLNEPRYASLPNIMKAKKKPLDKKTPADFGVDTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
KLKNEAGVL

Sequences:

>Translated_249_residues
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDQVEPLAVAKILKGVADAEQPGLIISGKQAIDDDSNQTGQMLAALLGSAQATFASKIEIGDGKAQVTREVD
GGLQTIEIKLPAVITTDLRLNEPRYASLPNIMKAKKKPLDKKTPADFGVDTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
KLKNEAGVL
>Mature_249_residues
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDQVEPLAVAKILKGVADAEQPGLIISGKQAIDDDSNQTGQMLAALLGSAQATFASKIEIGDGKAQVTREVD
GGLQTIEIKLPAVITTDLRLNEPRYASLPNIMKAKKKPLDKKTPADFGVDTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
KLKNEAGVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=57.8947368421053, Blast_Score=275, Evalue=2e-74,
Organism=Homo sapiens, GI62420877, Length=232, Percent_Identity=57.3275862068966, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=55.3359683794466, Blast_Score=248, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=53.6, Blast_Score=246, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=58.9430894308943, Blast_Score=260, Evalue=5e-70,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=58.9430894308943, Blast_Score=260, Evalue=5e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26614; Mature: 26614

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVV
CEEEEECHHHHCCCEEEEEECCCCCEEEEEEEEECCCCHHCCHHHHHHHHHCCCCCEEEE
VSIGPAKAEETLRTALAMGADRAILVETDDQVEPLAVAKILKGVADAEQPGLIISGKQAI
EEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC
DDDSNQTGQMLAALLGSAQATFASKIEIGDGKAQVTREVDGGLQTIEIKLPAVITTDLRL
CCCCCHHHHHHHHHHCCCHHHHEEEEEECCCHHEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLDKKTPADFGVDTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
KLKNEAGVL
HHHHHCCCC
>Mature Secondary Structure
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVV
CEEEEECHHHHCCCEEEEEECCCCCEEEEEEEEECCCCHHCCHHHHHHHHHCCCCCEEEE
VSIGPAKAEETLRTALAMGADRAILVETDDQVEPLAVAKILKGVADAEQPGLIISGKQAI
EEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCC
DDDSNQTGQMLAALLGSAQATFASKIEIGDGKAQVTREVDGGLQTIEIKLPAVITTDLRL
CCCCCHHHHHHHHHHCCCHHHHEEEEEECCCHHEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLDKKTPADFGVDTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
KLKNEAGVL
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]