Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

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The map label for this gene is 86361136

Identifier: 86361136

GI number: 86361136

Start: 458466

End: 459071

Strand: Reverse

Name: 86361136

Synonym: RHE_PF00406

Alternate gene names: NA

Gene position: 459071-458466 (Counterclockwise)

Preceding gene: 86361137

Following gene: 86361135

Centisome position: 71.45

GC content: 61.22

Gene sequence:

>606_bases
ATGAGTTTGCGCAACGGAAGCCTCCAGCATTTCCTGGAAGCCGCTTCGGTCGCTTTCGGCCAGTTCGCCAGGGCTCCGGA
AGCCCGCCGCTCGATCGGGCAGTTCTTCGCGGCGCTGGAGCGTCCGGGGACTGCGCGCGCGGGAGAGGGAAGCCGACTAC
CGGTCTGCGCTCACCTCGATATGGTGCTCGCGGTCGATACGTCCTATGCTTCGCTGGCGCGATTGATCGAGGGGTTCAAA
GGCATCGAGCCAATGCTTGAATGGCGTCGCCGCACAAAGTATGACCACACCACGGCCAGCGACAATTTCGTTGATGGGCA
TGCCAACGCCATGATCGTCGGGCCGGGTGGATTGGAGGAGCGAAGTGACCTGTGGTTCGGCGTGACATTGATGGCGCCTC
ACGTGCGCTATCCCGATCACGACCATGCGCCGGAGGAAGTCTATCTCGTGCTGTCCAAGGGAGAGTTCCAGCAGGGGGAG
GGGAACTGGTTTTCGCCCGGTATCGGCGGATCGTTCTATAATATTCCCGGGATCAAACATGCCATGAGGTCGCTGGAGAC
GCCGCTCTTCGCCTTCTGGGCGTTGCTTGCTGAGCGGTCGCATTGA

Upstream 100 bases:

>100_bases
TGCCCGCAACACGCATGCCGCGGTCTATGACGGTCTGCGCATCGCAAAGGATATATGATCGCAAGAGAGGCCGCCTGTCG
GCCGATCGGGAGGGAATGAT

Downstream 100 bases:

>100_bases
CGGCCGGCTGTCTAAAGCATGTCGCGCAAAGCTGGGCGGCGGTTGCGACAGCGGCTTACGACAAAAACAGTTGAAGCGCG
GACCAAGCGAATCTGAAAGA

Product: putative transcriptional regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSLRNGSLQHFLEAASVAFGQFARAPEARRSIGQFFAALERPGTARAGEGSRLPVCAHLDMVLAVDTSYASLARLIEGFK
GIEPMLEWRRRTKYDHTTASDNFVDGHANAMIVGPGGLEERSDLWFGVTLMAPHVRYPDHDHAPEEVYLVLSKGEFQQGE
GNWFSPGIGGSFYNIPGIKHAMRSLETPLFAFWALLAERSH

Sequences:

>Translated_201_residues
MSLRNGSLQHFLEAASVAFGQFARAPEARRSIGQFFAALERPGTARAGEGSRLPVCAHLDMVLAVDTSYASLARLIEGFK
GIEPMLEWRRRTKYDHTTASDNFVDGHANAMIVGPGGLEERSDLWFGVTLMAPHVRYPDHDHAPEEVYLVLSKGEFQQGE
GNWFSPGIGGSFYNIPGIKHAMRSLETPLFAFWALLAERSH
>Mature_200_residues
SLRNGSLQHFLEAASVAFGQFARAPEARRSIGQFFAALERPGTARAGEGSRLPVCAHLDMVLAVDTSYASLARLIEGFKG
IEPMLEWRRRTKYDHTTASDNFVDGHANAMIVGPGGLEERSDLWFGVTLMAPHVRYPDHDHAPEEVYLVLSKGEFQQGEG
NWFSPGIGGSFYNIPGIKHAMRSLETPLFAFWALLAERSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22245; Mature: 22114

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRNGSLQHFLEAASVAFGQFARAPEARRSIGQFFAALERPGTARAGEGSRLPVCAHLD
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHCCC
MVLAVDTSYASLARLIEGFKGIEPMLEWRRRTKYDHTTASDNFVDGHANAMIVGPGGLEE
EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCC
RSDLWFGVTLMAPHVRYPDHDHAPEEVYLVLSKGEFQQGEGNWFSPGIGGSFYNIPGIKH
CCCEEEEHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCHHH
AMRSLETPLFAFWALLAERSH
HHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLRNGSLQHFLEAASVAFGQFARAPEARRSIGQFFAALERPGTARAGEGSRLPVCAHLD
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHCCC
MVLAVDTSYASLARLIEGFKGIEPMLEWRRRTKYDHTTASDNFVDGHANAMIVGPGGLEE
EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCC
RSDLWFGVTLMAPHVRYPDHDHAPEEVYLVLSKGEFQQGEGNWFSPGIGGSFYNIPGIKH
CCCEEEEHEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCHHH
AMRSLETPLFAFWALLAERSH
HHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA