| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is ordL [H]
Identifier: 86361126
GI number: 86361126
Start: 448426
End: 449772
Strand: Reverse
Name: ordL [H]
Synonym: RHE_PF00396
Alternate gene names: 86361126
Gene position: 449772-448426 (Counterclockwise)
Preceding gene: 86361127
Following gene: 86361125
Centisome position: 70.0
GC content: 64.29
Gene sequence:
>1347_bases ATGAGCCGCCATGTGATCAAGCACCTGCCGACCGACACCGGCGTTTCGGGATGGGAGGCGACCAGCGAACGCACCTTTCC CGCATCGGCGCTTGAGCACGACATTACCGCCGACTGGCTGATCATCGGCGGCGGATTTGCCGGCCTGTCGGCAGCCCGCC GCCTCTCGCAATCGCGACCCAAGGACAAGATCGTCATCCTGGATGCGCGTGAGCTCGCCAAGGGGCCGGCCGGAAGGAAT TCCGGCTTCATGATCGACGTGCCGCATAATCTGTCATCGGGCGAGTATTCGGTCGCCGACGAAGCGGCGACCAAGGACGA GATTCGCCAGAACCGTCTGGCGATCTCCTTTGCGGCCGATGCTGCAGCGGAATATGGCCTGTCGCGCGAGACCTTCGATC CGGCGGGCAAGGTGAATGCCGCGGCCTCCGAGCGGGGGATGGGGCTCAACGACAATTACCGGAAGTCGCTCGAAAAGATC GGCGAGGACCATCGCGTTCTCGATGCCGCTCAGATGCTAGACATGACCGGCTCGCGCTACTATCTCGGCGGTCTCTATAC GCCGGGCGCGGTGATGATCCAGCCGGCCGACTATATTCGCGGCCTGGCGCGCGGGATCTCCTCCAAGGTGATCATCCACG AGCACTCGCCGGTCCTGGAGCTTGCCCCTGAGGGCCGGACCTGGAAGGCAAAGACGGCCCGCGGGTCGGTTTCCGCGCCC AAGGTCATTCTGGGGGTAAACGGCCATATTCAGAGTTTCGGCCACTTCCGGGGCCGGCTGATGCATATCTTCACCTATGC GTCGATGACCTCGGCCTTTTCCCAGAACGAGTTCGGCGGCGACGTCAGCGGCGTCGATCGCTGGGCGCTGCTGCCGGCCG ATCCGATGGGCGCCACGGTGCGCAAGATCACCAAGGACGGGCTTTCGAGGATCGTCGTCCGGACGCGGTTCACCTACGAC CCGAGCCTCAAAGTGTCGGAGAAGCGGGTCGCCGGCATCGCCGCCGAACAGCGGCGGTCGTTCGATGCCCGTTTCCCCGC GCTGGAGCGCGTTCCGATGGAATACAGCTGGGCGGGTGAACTCTGCCTCAGCCGAAACCATGTGCCGGCGTTCGGCGAGG TCGAGGAAGGACTTTTCTCCGCCTGCTGCGAAAACGGTCTGGGCACCGTCAAGAGCACGCTTGCCGGGATGATGGCGGCC GATCTTGCGACAGGAGCGGCCAGCCCGGAGCTCGACAAATTCAAGAACCAGCCGGCACCGACGCGATTGCCTCCCGAGCC CATAGCATGGCTCGGCGTCAACTCGGTGATCCGCTTTCAGGAATTGCGTGCGGGCCGCGAGGGATGA
Upstream 100 bases:
>100_bases TCGGCGGCCGCGACAAGTCGGTCTTCGCTCACGACAACTATTGCGAACTCAAGACCATCTGGATCGACATATCCGAACGG TCGGTCGACGAGACGATCCG
Downstream 100 bases:
>100_bases ACCCTCGGCTCACGCAATAGGAAGACTGCCGCCCGCAGGCTTCAATGAGAATGGGAACGAAAACCAGGAGTAACAACAAT GAAGACTTTGTGGAAGGCTC
Product: putative oxidoreductase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSRHVIKHLPTDTGVSGWEATSERTFPASALEHDITADWLIIGGGFAGLSAARRLSQSRPKDKIVILDARELAKGPAGRN SGFMIDVPHNLSSGEYSVADEAATKDEIRQNRLAISFAADAAAEYGLSRETFDPAGKVNAAASERGMGLNDNYRKSLEKI GEDHRVLDAAQMLDMTGSRYYLGGLYTPGAVMIQPADYIRGLARGISSKVIIHEHSPVLELAPEGRTWKAKTARGSVSAP KVILGVNGHIQSFGHFRGRLMHIFTYASMTSAFSQNEFGGDVSGVDRWALLPADPMGATVRKITKDGLSRIVVRTRFTYD PSLKVSEKRVAGIAAEQRRSFDARFPALERVPMEYSWAGELCLSRNHVPAFGEVEEGLFSACCENGLGTVKSTLAGMMAA DLATGAASPELDKFKNQPAPTRLPPEPIAWLGVNSVIRFQELRAGREG
Sequences:
>Translated_448_residues MSRHVIKHLPTDTGVSGWEATSERTFPASALEHDITADWLIIGGGFAGLSAARRLSQSRPKDKIVILDARELAKGPAGRN SGFMIDVPHNLSSGEYSVADEAATKDEIRQNRLAISFAADAAAEYGLSRETFDPAGKVNAAASERGMGLNDNYRKSLEKI GEDHRVLDAAQMLDMTGSRYYLGGLYTPGAVMIQPADYIRGLARGISSKVIIHEHSPVLELAPEGRTWKAKTARGSVSAP KVILGVNGHIQSFGHFRGRLMHIFTYASMTSAFSQNEFGGDVSGVDRWALLPADPMGATVRKITKDGLSRIVVRTRFTYD PSLKVSEKRVAGIAAEQRRSFDARFPALERVPMEYSWAGELCLSRNHVPAFGEVEEGLFSACCENGLGTVKSTLAGMMAA DLATGAASPELDKFKNQPAPTRLPPEPIAWLGVNSVIRFQELRAGREG >Mature_447_residues SRHVIKHLPTDTGVSGWEATSERTFPASALEHDITADWLIIGGGFAGLSAARRLSQSRPKDKIVILDARELAKGPAGRNS GFMIDVPHNLSSGEYSVADEAATKDEIRQNRLAISFAADAAAEYGLSRETFDPAGKVNAAASERGMGLNDNYRKSLEKIG EDHRVLDAAQMLDMTGSRYYLGGLYTPGAVMIQPADYIRGLARGISSKVIIHEHSPVLELAPEGRTWKAKTARGSVSAPK VILGVNGHIQSFGHFRGRLMHIFTYASMTSAFSQNEFGGDVSGVDRWALLPADPMGATVRKITKDGLSRIVVRTRFTYDP SLKVSEKRVAGIAAEQRRSFDARFPALERVPMEYSWAGELCLSRNHVPAFGEVEEGLFSACCENGLGTVKSTLAGMMAAD LATGAASPELDKFKNQPAPTRLPPEPIAWLGVNSVIRFQELRAGREG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 48515; Mature: 48383
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHVIKHLPTDTGVSGWEATSERTFPASALEHDITADWLIIGGGFAGLSAARRLSQSRP CCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCC KDKIVILDARELAKGPAGRNSGFMIDVPHNLSSGEYSVADEAATKDEIRQNRLAISFAAD CCCEEEEEHHHHHCCCCCCCCCEEEECCCCCCCCCEECCHHHHHHHHHHHHHEEEEEHHH AAAEYGLSRETFDPAGKVNAAASERGMGLNDNYRKSLEKIGEDHRVLDAAQMLDMTGSRY HHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEE YLGGLYTPGAVMIQPADYIRGLARGISSKVIIHEHSPVLELAPEGRTWKAKTARGSVSAP EECEEECCCEEEECCHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCC KVILGVNGHIQSFGHFRGRLMHIFTYASMTSAFSQNEFGGDVSGVDRWALLPADPMGATV EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHH RKITKDGLSRIVVRTRFTYDPSLKVSEKRVAGIAAEQRRSFDARFPALERVPMEYSWAGE HHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCH LCLSRNHVPAFGEVEEGLFSACCENGLGTVKSTLAGMMAADLATGAASPELDKFKNQPAP HHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCC TRLPPEPIAWLGVNSVIRFQELRAGREG CCCCCCCEEECCHHHHHHHHHHHCCCCC >Mature Secondary Structure SRHVIKHLPTDTGVSGWEATSERTFPASALEHDITADWLIIGGGFAGLSAARRLSQSRP CCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHCCC KDKIVILDARELAKGPAGRNSGFMIDVPHNLSSGEYSVADEAATKDEIRQNRLAISFAAD CCCEEEEEHHHHHCCCCCCCCCEEEECCCCCCCCCEECCHHHHHHHHHHHHHEEEEEHHH AAAEYGLSRETFDPAGKVNAAASERGMGLNDNYRKSLEKIGEDHRVLDAAQMLDMTGSRY HHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCEE YLGGLYTPGAVMIQPADYIRGLARGISSKVIIHEHSPVLELAPEGRTWKAKTARGSVSAP EECEEECCCEEEECCHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCC KVILGVNGHIQSFGHFRGRLMHIFTYASMTSAFSQNEFGGDVSGVDRWALLPADPMGATV EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHH RKITKDGLSRIVVRTRFTYDPSLKVSEKRVAGIAAEQRRSFDARFPALERVPMEYSWAGE HHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCH LCLSRNHVPAFGEVEEGLFSACCENGLGTVKSTLAGMMAADLATGAASPELDKFKNQPAP HHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCC TRLPPEPIAWLGVNSVIRFQELRAGREG CCCCCCCEEECCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]