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The map label for this gene is 86361103

Identifier: 86361103

GI number: 86361103

Start: 420739

End: 421419

Strand: Direct

Name: 86361103

Synonym: RHE_PF00373

Alternate gene names: NA

Gene position: 420739-421419 (Clockwise)

Preceding gene: 86361098

Following gene: 86361104

Centisome position: 65.48

GC content: 63.0

Gene sequence:

>681_bases
ATGGACTCTTGCAAATTTTTGAGACTCGCGTATCATAAAGATATGGATGTCTCACGTCAACAGAACGAAACAGCGAGGAC
CGAGCGAGGCCCCCGTGCCCGCACGCGAAAACTGATGCTCGAAACCGCAACGCGGCTCATGCAGTCGGGCATCACTCCCT
CGGTAAGCGAAGTGGCCGAGGCGGCCGAAGTGTCGCGCGCGACGGCCTACCGCTACTTTCCGAGCCAGGCCGCGCTCGTG
CATGCCGTGGTCGATGAGGCTCTGGGACCAATACTCGGCTGGTCGTCCGACAGTCCGGATGCACGCACCCGCGTCGCCGA
CCTTTTGGCGACCGCGATGCCGCGCATCGACGAGTTCGAGGCCACTTTCAAGGCCGCGCTGAAACTCTCGCTGGACCAGT
GGGCACAGCGTCAGGCGGGAACGCTCGGCAACGAGCCGCTGTTCACGCGCGGCCACCGCGTCGACCTGCTGAAGTGCGTT
ACGGCCCCTCTGCAGGGCACCGTGCCGCCTGAGTCCCGGGAACGCCTTGCACAGGCGCTTTCGCTTGTTTTCGGCGTCGA
GGTGCTGATCGTTCTGAAGGATATCTGGGGCCTCACCTCCGAAAGCGCCCAGTCTGTTGCCGAGTGGGCTGCCAAGGCGC
TCGTTGACAGCGCGTTACGTCAGGCTGAGAGCAAAGGATGA

Upstream 100 bases:

>100_bases
CTCGCCCTTCGTGTCGGCCGTGCCGACTGCGTAGATCCGCTTCATTTCCCCTCCCAGACCGGTTGGGTTCCTCCCCAGCA
CATCCACCACGGGGCAAGCG

Downstream 100 bases:

>100_bases
TATGGAAGCCCGCCAACTGGTTCGACCAGATGAGGTGATGTCGTTTGTATCGTGGTCGCCGTTGGCGACGAGAAAAGAAA
GATCGCTCCACAGATCTGCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR Family Regulatory Protein; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Tetr-Family Regulatory Protein; Transcriptional Regulator TetR-Family; Regulatory Protein TetR

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MDSCKFLRLAYHKDMDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAEAAEVSRATAYRYFPSQAALV
HAVVDEALGPILGWSSDSPDARTRVADLLATAMPRIDEFEATFKAALKLSLDQWAQRQAGTLGNEPLFTRGHRVDLLKCV
TAPLQGTVPPESRERLAQALSLVFGVEVLIVLKDIWGLTSESAQSVAEWAAKALVDSALRQAESKG

Sequences:

>Translated_226_residues
MDSCKFLRLAYHKDMDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAEAAEVSRATAYRYFPSQAALV
HAVVDEALGPILGWSSDSPDARTRVADLLATAMPRIDEFEATFKAALKLSLDQWAQRQAGTLGNEPLFTRGHRVDLLKCV
TAPLQGTVPPESRERLAQALSLVFGVEVLIVLKDIWGLTSESAQSVAEWAAKALVDSALRQAESKG
>Mature_226_residues
MDSCKFLRLAYHKDMDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAEAAEVSRATAYRYFPSQAALV
HAVVDEALGPILGWSSDSPDARTRVADLLATAMPRIDEFEATFKAALKLSLDQWAQRQAGTLGNEPLFTRGHRVDLLKCV
TAPLQGTVPPESRERLAQALSLVFGVEVLIVLKDIWGLTSESAQSVAEWAAKALVDSALRQAESKG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24765; Mature: 24765

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSCKFLRLAYHKDMDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAE
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AAEVSRATAYRYFPSQAALVHAVVDEALGPILGWSSDSPDARTRVADLLATAMPRIDEFE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHH
ATFKAALKLSLDQWAQRQAGTLGNEPLFTRGHRVDLLKCVTAPLQGTVPPESRERLAQAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
SLVFGVEVLIVLKDIWGLTSESAQSVAEWAAKALVDSALRQAESKG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSCKFLRLAYHKDMDVSRQQNETARTERGPRARTRKLMLETATRLMQSGITPSVSEVAE
CCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AAEVSRATAYRYFPSQAALVHAVVDEALGPILGWSSDSPDARTRVADLLATAMPRIDEFE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHH
ATFKAALKLSLDQWAQRQAGTLGNEPLFTRGHRVDLLKCVTAPLQGTVPPESRERLAQAL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH
SLVFGVEVLIVLKDIWGLTSESAQSVAEWAAKALVDSALRQAESKG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA