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The map label for this gene is ycjN [C]

Identifier: 86361104

GI number: 86361104

Start: 421774

End: 423084

Strand: Direct

Name: ycjN [C]

Synonym: RHE_PF00374

Alternate gene names: 86361104

Gene position: 421774-423084 (Clockwise)

Preceding gene: 86361103

Following gene: 86361105

Centisome position: 65.64

GC content: 55.68

Gene sequence:

>1311_bases
ATGCGCAAAACTATGACCGGTCTCATTGCCGGTGTCGGATTGATGTGGGCCTGCGGCACGTCCGCACAGGCCCAGGAACT
GACAATTTTCTGGGCCGAGTGGGACCCGGCAAATTACCTTCAGGAACTTGCCAACGAATACGAGGCTGAAACCGGCGTCA
AGGTCACTGTCGAGACCACACCATGGTCCGACTTTCAGACCAAGGCCTTCACCGAATTCAACGCAAAGGGCTCAGCCTAT
GACCTGGTCGTCGGCGACAGCCAGTGGATCGGGGCTGCGTCAGAAGCAGGACACTACGTCGATCTCACCGAATTTTTCAC
CAAGCACAATCTGACCCAGGTGATGGCTCCGGCGACGGTGAAGTACTACTCCGAGTATCCGGCGAACTCGAAGAAGTACT
GGTCAGTTCCTGCAGAAGGTGACGCCGTCGGCTGGTCATACCGAAAGGACTGGTTCGAAGATCCCAAGGAGATGGAGGCG
TTCAAGGCGAAATACGGTTACGACCTCGCCCCACCGAAGACATGGGCCCAGATGCGCGACATCGCCGAGTTCTTCCATCG
CCCAGATCAGAAGCGCTACGGAATAGCCATCTACACCGACAATTCTTATGACGGTCTCGTCATGGGTGTCGAGAACGCAA
TCTTCTCGTTCGGAGGTGAACTCGGCGACTACCAGAACTACAAGGTTGACGGCATCGTCAACTCTGAGAAGAACGTCAAA
GCGCTCGAATTGTATCGCGAGCTGTACGGCTTTACGCCTCCGGGCTGGGCCAAGTCCTTCTTCGTCGAGAATAACCAGGC
GATTACCGAGAACCTGGCGGCGATGAGCATGAACTATTTCGCCTTCTTCCCGGCTCTGGTGAACGAGGCATCGAACCCGA
ACGCCAAGGTTACCGGCTTCTTTGCCAACCCGGCTGGTCCGAACGGCGAGCAGTTCGCAGCGCTCGGTGGCCAGGGCATA
TCGATCATCTCCTATTCAAAGAACCAGGAAGAGGCGATGAAATTCCTCGAATGGTTCATCAAGGACGAGACCCAGAAGCG
CTGGGCCGAACTCGGCGGCTACACGGCAAGCGCCAAGGTGCTTGAATCTCCGGAATTTCAGAACGCGACACCCTATAACA
AGGCTTTCTACGAGACCATGTTCAAGGTGAAGGACTTTTGGGCAACTCCTGAATATGCCGAACTGCTGATCCAGATGAAC
CAGCGGATTTATCCTTTCGTCACCGCTGGCCAAGGCTCAGCGAAGGAAGCGCTCGACGCTCTGGCGGCTGACTGGAACGC
GACGTTCAAGAAATACGGACGCAACAAGTAG

Upstream 100 bases:

>100_bases
CGGGGAGGACGCCAGCACGAAAACCACCCAGGAGGATCAAGAAGCCAGATCGGGAGGCCCGCGACGACGCGGGAAGCGTG
CATAAATGGGAGGAAACGTT

Downstream 100 bases:

>100_bases
CAAAACGCGATCAGCGGAAGGGGCCCCGCCGCCCCTCCCATTTCATTCTGCATCTCGCGCCCAAGGCGCGGTTCGAGAGG
GCGCGGCGCCCGGCATTCAC

Product: putative sugar ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MRKTMTGLIAGVGLMWACGTSAQAQELTIFWAEWDPANYLQELANEYEAETGVKVTVETTPWSDFQTKAFTEFNAKGSAY
DLVVGDSQWIGAASEAGHYVDLTEFFTKHNLTQVMAPATVKYYSEYPANSKKYWSVPAEGDAVGWSYRKDWFEDPKEMEA
FKAKYGYDLAPPKTWAQMRDIAEFFHRPDQKRYGIAIYTDNSYDGLVMGVENAIFSFGGELGDYQNYKVDGIVNSEKNVK
ALELYRELYGFTPPGWAKSFFVENNQAITENLAAMSMNYFAFFPALVNEASNPNAKVTGFFANPAGPNGEQFAALGGQGI
SIISYSKNQEEAMKFLEWFIKDETQKRWAELGGYTASAKVLESPEFQNATPYNKAFYETMFKVKDFWATPEYAELLIQMN
QRIYPFVTAGQGSAKEALDALAADWNATFKKYGRNK

Sequences:

>Translated_436_residues
MRKTMTGLIAGVGLMWACGTSAQAQELTIFWAEWDPANYLQELANEYEAETGVKVTVETTPWSDFQTKAFTEFNAKGSAY
DLVVGDSQWIGAASEAGHYVDLTEFFTKHNLTQVMAPATVKYYSEYPANSKKYWSVPAEGDAVGWSYRKDWFEDPKEMEA
FKAKYGYDLAPPKTWAQMRDIAEFFHRPDQKRYGIAIYTDNSYDGLVMGVENAIFSFGGELGDYQNYKVDGIVNSEKNVK
ALELYRELYGFTPPGWAKSFFVENNQAITENLAAMSMNYFAFFPALVNEASNPNAKVTGFFANPAGPNGEQFAALGGQGI
SIISYSKNQEEAMKFLEWFIKDETQKRWAELGGYTASAKVLESPEFQNATPYNKAFYETMFKVKDFWATPEYAELLIQMN
QRIYPFVTAGQGSAKEALDALAADWNATFKKYGRNK
>Mature_436_residues
MRKTMTGLIAGVGLMWACGTSAQAQELTIFWAEWDPANYLQELANEYEAETGVKVTVETTPWSDFQTKAFTEFNAKGSAY
DLVVGDSQWIGAASEAGHYVDLTEFFTKHNLTQVMAPATVKYYSEYPANSKKYWSVPAEGDAVGWSYRKDWFEDPKEMEA
FKAKYGYDLAPPKTWAQMRDIAEFFHRPDQKRYGIAIYTDNSYDGLVMGVENAIFSFGGELGDYQNYKVDGIVNSEKNVK
ALELYRELYGFTPPGWAKSFFVENNQAITENLAAMSMNYFAFFPALVNEASNPNAKVTGFFANPAGPNGEQFAALGGQGI
SIISYSKNQEEAMKFLEWFIKDETQKRWAELGGYTASAKVLESPEFQNATPYNKAFYETMFKVKDFWATPEYAELLIQMN
QRIYPFVTAGQGSAKEALDALAADWNATFKKYGRNK

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 49158; Mature: 49158

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTMTGLIAGVGLMWACGTSAQAQELTIFWAEWDPANYLQELANEYEAETGVKVTVETT
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEC
PWSDFQTKAFTEFNAKGSAYDLVVGDSQWIGAASEAGHYVDLTEFFTKHNLTQVMAPATV
CCCCCCHHHHHEECCCCCEEEEEECCCHHCCCHHCCCCEEEHHHHHHHCCHHHHHCCHHH
KYYSEYPANSKKYWSVPAEGDAVGWSYRKDWFEDPKEMEAFKAKYGYDLAPPKTWAQMRD
HHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH
IAEFFHRPDQKRYGIAIYTDNSYDGLVMGVENAIFSFGGELGDYQNYKVDGIVNSEKNVK
HHHHHHCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCHH
ALELYRELYGFTPPGWAKSFFVENNQAITENLAAMSMNYFAFFPALVNEASNPNAKVTGF
HHHHHHHHHCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
FANPAGPNGEQFAALGGQGISIISYSKNQEEAMKFLEWFIKDETQKRWAELGGYTASAKV
ECCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH
LESPEFQNATPYNKAFYETMFKVKDFWATPEYAELLIQMNQRIYPFVTAGQGSAKEALDA
HCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
LAADWNATFKKYGRNK
HHHCHHHHHHHHCCCC
>Mature Secondary Structure
MRKTMTGLIAGVGLMWACGTSAQAQELTIFWAEWDPANYLQELANEYEAETGVKVTVETT
CCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEC
PWSDFQTKAFTEFNAKGSAYDLVVGDSQWIGAASEAGHYVDLTEFFTKHNLTQVMAPATV
CCCCCCHHHHHEECCCCCEEEEEECCCHHCCCHHCCCCEEEHHHHHHHCCHHHHHCCHHH
KYYSEYPANSKKYWSVPAEGDAVGWSYRKDWFEDPKEMEAFKAKYGYDLAPPKTWAQMRD
HHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH
IAEFFHRPDQKRYGIAIYTDNSYDGLVMGVENAIFSFGGELGDYQNYKVDGIVNSEKNVK
HHHHHHCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEECCCCCHH
ALELYRELYGFTPPGWAKSFFVENNQAITENLAAMSMNYFAFFPALVNEASNPNAKVTGF
HHHHHHHHHCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
FANPAGPNGEQFAALGGQGISIISYSKNQEEAMKFLEWFIKDETQKRWAELGGYTASAKV
ECCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHH
LESPEFQNATPYNKAFYETMFKVKDFWATPEYAELLIQMNQRIYPFVTAGQGSAKEALDA
HCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH
LAADWNATFKKYGRNK
HHHCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]