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The map label for this gene is yurN [H]

Identifier: 86361046

GI number: 86361046

Start: 355280

End: 356359

Strand: Direct

Name: yurN [H]

Synonym: RHE_PF00316

Alternate gene names: 86361046

Gene position: 355280-356359 (Clockwise)

Preceding gene: 86361043

Following gene: 86361047

Centisome position: 55.3

GC content: 59.35

Gene sequence:

>1080_bases
ATGTGCTATGTCCTTGGCAGGAGGAAGAACAGGCGGCGTCCATCCGCCCGAACGGCTCTGGACTTTAGGTTAGAGAAGCC
CAGACGTCGCCAGCTGCAGAGTGCCGACCAGGAGGAAGCATCGGTGTCCATATCGAATTCGGTCATAGTGACGGATGGCG
CCCCGGCAGAGCCACGCCGGAAGGTCGCGGTTCTGTCCAAGCGCCAGCGCAAGATTCGCAGCGCGTTGGTCGCCTATTCC
TTCATCGCGCCGAATTTCCTCGGCTTCGCCGTCTTCACGCTCGGCCCGATCCTCTTCGCCTTCGCGCTCGCCTTCATGCA
CTGGGACGGCTCGAATGCGATCACATTCGCGGGGTTCGACAATTTCTGGCGACTGTTCAACGACAAGGCCTTCATCGCGG
CCTTCTGGAACACGATCATCTATACGGTCGCCTCGGTGCCAGCGACGCTGCTCTGCGCGCTCGGCCTTGCCGTCCTTCTC
AACCAGAAGATCGCCGGGCGGAATTTCTTCCGCACGGCGATGTTCTTTCCCTATGTCGCTTCGCTGGTCGCGGTCGCCGT
CGTCTGGAACATGATCTTCAATCCCGAGATGGGACCGGTGAACATGATCCTCTACACGCTCGGCCTCGACCCGAAGAACA
TGCCGGGATGGGCGGCCGACCGCCACTGGGCGATGGTGACGGTGATCCTCTTCGGCATCTGGAAGAACATGGGCTATTAC
ATGGTCATCTATTTGGCCGGCCTGCAGGGGATCAATGCCGAACTCTATGAGGCTGCTGATCTCGACGGGGCCAACTCCTG
GCAGAAGTTCATCCATGTCACCGTGCCGCAGCTCGGACCGACCACCTTCTTCGTCACGGTCATGCTGACGATCCAGTCCT
TCAAGGTGTTCGATCAGATCTTCATGATCACCCAGGGCGGCCCCGGCACATCGACGCTCGTCCTCGTCTACCACATCTAT
AACGAGGCCTTCATTTCCTGGGATCTCGGCTATTCCAGCATGATTTCGCTGGTACTGTTTTTCCTGGTGCTCGCGGTCAC
GATCTTCCAGTTCCGCCGCCAGAGGGAGGACGAGGCATGA

Upstream 100 bases:

>100_bases
TCGACCGGCCTCTGGCCTTCATCCTCACCTATCATATGTTTTCGGCGTTCGCCATAAAATTTGTATGATCTATTCAGAAC
TTGTTTGACCAATACCGGAG

Downstream 100 bases:

>100_bases
GGATCGCCGGGCGCAAGATCACCGTCAAAACGGTCCTCCTCTATGCCATCGTCATCACGGTGACGATTGTCATGCTGATG
CCCTTCGCCTGGATGCTCTC

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MCYVLGRRKNRRRPSARTALDFRLEKPRRRQLQSADQEEASVSISNSVIVTDGAPAEPRRKVAVLSKRQRKIRSALVAYS
FIAPNFLGFAVFTLGPILFAFALAFMHWDGSNAITFAGFDNFWRLFNDKAFIAAFWNTIIYTVASVPATLLCALGLAVLL
NQKIAGRNFFRTAMFFPYVASLVAVAVVWNMIFNPEMGPVNMILYTLGLDPKNMPGWAADRHWAMVTVILFGIWKNMGYY
MVIYLAGLQGINAELYEAADLDGANSWQKFIHVTVPQLGPTTFFVTVMLTIQSFKVFDQIFMITQGGPGTSTLVLVYHIY
NEAFISWDLGYSSMISLVLFFLVLAVTIFQFRRQREDEA

Sequences:

>Translated_359_residues
MCYVLGRRKNRRRPSARTALDFRLEKPRRRQLQSADQEEASVSISNSVIVTDGAPAEPRRKVAVLSKRQRKIRSALVAYS
FIAPNFLGFAVFTLGPILFAFALAFMHWDGSNAITFAGFDNFWRLFNDKAFIAAFWNTIIYTVASVPATLLCALGLAVLL
NQKIAGRNFFRTAMFFPYVASLVAVAVVWNMIFNPEMGPVNMILYTLGLDPKNMPGWAADRHWAMVTVILFGIWKNMGYY
MVIYLAGLQGINAELYEAADLDGANSWQKFIHVTVPQLGPTTFFVTVMLTIQSFKVFDQIFMITQGGPGTSTLVLVYHIY
NEAFISWDLGYSSMISLVLFFLVLAVTIFQFRRQREDEA
>Mature_359_residues
MCYVLGRRKNRRRPSARTALDFRLEKPRRRQLQSADQEEASVSISNSVIVTDGAPAEPRRKVAVLSKRQRKIRSALVAYS
FIAPNFLGFAVFTLGPILFAFALAFMHWDGSNAITFAGFDNFWRLFNDKAFIAAFWNTIIYTVASVPATLLCALGLAVLL
NQKIAGRNFFRTAMFFPYVASLVAVAVVWNMIFNPEMGPVNMILYTLGLDPKNMPGWAADRHWAMVTVILFGIWKNMGYY
MVIYLAGLQGINAELYEAADLDGANSWQKFIHVTVPQLGPTTFFVTVMLTIQSFKVFDQIFMITQGGPGTSTLVLVYHIY
NEAFISWDLGYSSMISLVLFFLVLAVTIFQFRRQREDEA

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=32.7586206896552, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787570, Length=243, Percent_Identity=32.9218106995885, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1790465, Length=256, Percent_Identity=29.6875, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40567; Mature: 40567

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYVLGRRKNRRRPSARTALDFRLEKPRRRQLQSADQEEASVSISNSVIVTDGAPAEPRR
CEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHCEEEECCCEEEECCCCCCHHH
KVAVLSKRQRKIRSALVAYSFIAPNFLGFAVFTLGPILFAFALAFMHWDGSNAITFAGFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCHH
NFWRLFNDKAFIAAFWNTIIYTVASVPATLLCALGLAVLLNQKIAGRNFFRTAMFFPYVA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH
SLVAVAVVWNMIFNPEMGPVNMILYTLGLDPKNMPGWAADRHWAMVTVILFGIWKNMGYY
HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
MVIYLAGLQGINAELYEAADLDGANSWQKFIHVTVPQLGPTTFFVTVMLTIQSFKVFDQI
EEHEECCCCCCCHHHHHHCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
FMITQGGPGTSTLVLVYHIYNEAFISWDLGYSSMISLVLFFLVLAVTIFQFRRQREDEA
EEEECCCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MCYVLGRRKNRRRPSARTALDFRLEKPRRRQLQSADQEEASVSISNSVIVTDGAPAEPRR
CEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHCEEEECCCEEEECCCCCCHHH
KVAVLSKRQRKIRSALVAYSFIAPNFLGFAVFTLGPILFAFALAFMHWDGSNAITFAGFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECCHH
NFWRLFNDKAFIAAFWNTIIYTVASVPATLLCALGLAVLLNQKIAGRNFFRTAMFFPYVA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH
SLVAVAVVWNMIFNPEMGPVNMILYTLGLDPKNMPGWAADRHWAMVTVILFGIWKNMGYY
HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
MVIYLAGLQGINAELYEAADLDGANSWQKFIHVTVPQLGPTTFFVTVMLTIQSFKVFDQI
EEHEECCCCCCCHHHHHHCCCCCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
FMITQGGPGTSTLVLVYHIYNEAFISWDLGYSSMISLVLFFLVLAVTIFQFRRQREDEA
EEEECCCCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]