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The map label for this gene is glxA [H]

Identifier: 86361043

GI number: 86361043

Start: 351474

End: 352484

Strand: Direct

Name: glxA [H]

Synonym: RHE_PF00313

Alternate gene names: 86361043

Gene position: 351474-352484 (Clockwise)

Preceding gene: 86361042

Following gene: 86361046

Centisome position: 54.7

GC content: 67.66

Gene sequence:

>1011_bases
ATGACGGAAGTCGCGCAGCCCTTCGAGATTCCCGTTTTCGTCGTCGTGCCGCCGCGCGTGCTGCTGCTCGACGTCGCCGG
TCCGATCGAAGTGCTGCGCAAGGCCAATCTCGAACAGCAGGCGGTGCGCTTCAGCGTCACCTATATCGGCCCGTCGGCAA
CGGTCGGCAGCTCGATCGGCCTTTCCGTCACCGGCGTCGCCGCCCTGCCGGAGCGCTTGCCCGATCGGGCGCTCGTCGTC
ATCGCCGGCAGCGCCGACGCGCCGATGGAGAACAACCGTCCTTGGGACGGGCAGGAGCGCGCCGCGCAGGCCGGCATCGT
CGCATGGCTGAAGCGCGCCATTCGTCCGGGAGTTCGATTGGTCTCGATCTGCTCCGGCGCCCTGCTCGCCGCCGAGGCCG
GAATGCTCGATGGCCGCGAATGCACCACCCATCACGGCTGCATGGAAGACCTGGCCAGACTCGCGCCCACCGCGCGCATC
CGGGACAACCGCCTCTATGTTGAGGATGGAGAGCGCCTGACGAGCGCCGGCATCACCGCCGGCATTGATCTCATGCTGTA
TATCGTCGCCGAAGCGACGGGACATGCCTGCGCGCTTGCGGTGGCGCGGTATCTCGTCGTCTATCTCAGGCGCGCCGGCT
CGGACCCGCAGCTTTCGCCCTGGCTCGAAGGCCGTAACCATATCCATCCGGTCATTCATCGTGCACAGGATGCCGTCGCC
GCCGATCCCACTCGCGACTGGTCGGTCGCCTCGCTTGCGCACCTCAGCGGTGCCAGTCCGCGGAACCTCTCGCGGCTGTT
CAACGAGCAGACCGGCATGAGCGTCACGGATTTCGTCAACCGCATGCGCGTGGCGCTTGCCCGGGAGATGCTCGCCGGTT
CAAGGCTGGATATGGAGGCTGTGGCGATGCGCTCAGGCTTCGGCTCGGCCCGGCAGCTGCGCCGAGCGTGGAACCGTCTG
CACGACAGCCCGCCGAGCGCAGCACGGCCGAGGCCGGCCTTGGGTTCATAG

Upstream 100 bases:

>100_bases
GGGAAATACGCGGCCGCACGGAACTGGTCCTGTCGGGCCGTTTCGCCAGGATCTCAACCGTCGAACAGGCGCTGGCGGGG
CGCGCTGAGCAACTCGCCGC

Downstream 100 bases:

>100_bases
AGGAACAGAAAGAGCGGCGTGACCGGCCTGATCTTCGGCAGCGACGGCTGCGGCGCCCAACGCCTCTGCTCCCCAGATTT
CGATCTGCGTCAGCGCCGGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTEVAQPFEIPVFVVVPPRVLLLDVAGPIEVLRKANLEQQAVRFSVTYIGPSATVGSSIGLSVTGVAALPERLPDRALVV
IAGSADAPMENNRPWDGQERAAQAGIVAWLKRAIRPGVRLVSICSGALLAAEAGMLDGRECTTHHGCMEDLARLAPTARI
RDNRLYVEDGERLTSAGITAGIDLMLYIVAEATGHACALAVARYLVVYLRRAGSDPQLSPWLEGRNHIHPVIHRAQDAVA
ADPTRDWSVASLAHLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEAVAMRSGFGSARQLRRAWNRL
HDSPPSAARPRPALGS

Sequences:

>Translated_336_residues
MTEVAQPFEIPVFVVVPPRVLLLDVAGPIEVLRKANLEQQAVRFSVTYIGPSATVGSSIGLSVTGVAALPERLPDRALVV
IAGSADAPMENNRPWDGQERAAQAGIVAWLKRAIRPGVRLVSICSGALLAAEAGMLDGRECTTHHGCMEDLARLAPTARI
RDNRLYVEDGERLTSAGITAGIDLMLYIVAEATGHACALAVARYLVVYLRRAGSDPQLSPWLEGRNHIHPVIHRAQDAVA
ADPTRDWSVASLAHLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEAVAMRSGFGSARQLRRAWNRL
HDSPPSAARPRPALGS
>Mature_335_residues
TEVAQPFEIPVFVVVPPRVLLLDVAGPIEVLRKANLEQQAVRFSVTYIGPSATVGSSIGLSVTGVAALPERLPDRALVVI
AGSADAPMENNRPWDGQERAAQAGIVAWLKRAIRPGVRLVSICSGALLAAEAGMLDGRECTTHHGCMEDLARLAPTARIR
DNRLYVEDGERLTSAGITAGIDLMLYIVAEATGHACALAVARYLVVYLRRAGSDPQLSPWLEGRNHIHPVIHRAQDAVAA
DPTRDWSVASLAHLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEAVAMRSGFGSARQLRRAWNRLH
DSPPSAARPRPALGS

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36194; Mature: 36063

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVAQPFEIPVFVVVPPRVLLLDVAGPIEVLRKANLEQQAVRFSVTYIGPSATVGSSIG
CCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHCCCHHHHEEEEEEEECCCCCCCCCCC
LSVTGVAALPERLPDRALVVIAGSADAPMENNRPWDGQERAAQAGIVAWLKRAIRPGVRL
CEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
VSICSGALLAAEAGMLDGRECTTHHGCMEDLARLAPTARIRDNRLYVEDGERLTSAGITA
HHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHCCHHH
GIDLMLYIVAEATGHACALAVARYLVVYLRRAGSDPQLSPWLEGRNHIHPVIHRAQDAVA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHC
ADPTRDWSVASLAHLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEA
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
VAMRSGFGSARQLRRAWNRLHDSPPSAARPRPALGS
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEVAQPFEIPVFVVVPPRVLLLDVAGPIEVLRKANLEQQAVRFSVTYIGPSATVGSSIG
CCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHCCCHHHHEEEEEEEECCCCCCCCCCC
LSVTGVAALPERLPDRALVVIAGSADAPMENNRPWDGQERAAQAGIVAWLKRAIRPGVRL
CEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHH
VSICSGALLAAEAGMLDGRECTTHHGCMEDLARLAPTARIRDNRLYVEDGERLTSAGITA
HHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHCCHHH
GIDLMLYIVAEATGHACALAVARYLVVYLRRAGSDPQLSPWLEGRNHIHPVIHRAQDAVA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHHC
ADPTRDWSVASLAHLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEA
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
VAMRSGFGSARQLRRAWNRLHDSPPSAARPRPALGS
HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]