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The map label for this gene is yrpE [H]

Identifier: 86360889

GI number: 86360889

Start: 167847

End: 168497

Strand: Direct

Name: yrpE [H]

Synonym: RHE_PF00158

Alternate gene names: 86360889

Gene position: 167847-168497 (Clockwise)

Preceding gene: 86360888

Following gene: 86360901

Centisome position: 26.12

GC content: 56.84

Gene sequence:

>651_bases
ATGACAACACTCAGCTACGCACTGGCAGTTTCCGCGACATTGACGTTTGCAGGAATGGCAGGCGCTGGGACATCCTCGGG
AAACAACCACAACCACAGCCATACCCACGATGAAAAGGGGTCGGTGTATGATGGGTGTTTCGATGACGATCTGGTAAAGG
CGCGCGAACTGTCGGATTGGGAAGGCGACTGGCAGTCGGTCTACCCCTATCTTGTCGACGGAACCTTGGATCCGGTGATG
GGCGACAAGGCGAAACGTGGCGACAAGAACGCCGGGGAATATCGTGCCTACTACGAGACGGGATACAAGACCGACGTCGA
CCGGATCGTCATCAGCGGAAAGACGGTTACGTTTTCCCGCGGCAAGGACTCAGTGACCGGAGACTACGAGACGGATGGGC
ACGAAATCCTCACCTACAAGAAAGGCAATCGAGGGGTTCGTTTCATCTTCAGGAAAAGCGCCGGCGATGACGCGGCACCT
CAGTTCATACAGTTCAGCGACCACATCGTCGCCCCCGAGAAGGCCGACCACTACCATCTATATTGGGGCAATGACCGCGC
TGCGCTCCTGAATGAGGTCACCAACTGGCCGACCTACTACCCCTCAAGCCTGAGTGGTAAGCAGATCGCCGAGGAGATGC
TGAGCCACTGA

Upstream 100 bases:

>100_bases
CCGTCAAACCGCGCTAGTTCGCACTGGTAATGTTATTACATTACGGACTAGAACCAGCCGTGACGGCCAATCGAAAGGGT
TTCGGTGAATGAACAAGGCG

Downstream 100 bases:

>100_bases
GTTGACCTTTTCGGGCTAGCTTGAAGCACTCTGCCGGAGCAGGTTTTCGTCAGGGCAAAGGCGATTGGCGAAGGCATATC
CATTGGTACGTCCGAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTTLSYALAVSATLTFAGMAGAGTSSGNNHNHSHTHDEKGSVYDGCFDDDLVKARELSDWEGDWQSVYPYLVDGTLDPVM
GDKAKRGDKNAGEYRAYYETGYKTDVDRIVISGKTVTFSRGKDSVTGDYETDGHEILTYKKGNRGVRFIFRKSAGDDAAP
QFIQFSDHIVAPEKADHYHLYWGNDRAALLNEVTNWPTYYPSSLSGKQIAEEMLSH

Sequences:

>Translated_216_residues
MTTLSYALAVSATLTFAGMAGAGTSSGNNHNHSHTHDEKGSVYDGCFDDDLVKARELSDWEGDWQSVYPYLVDGTLDPVM
GDKAKRGDKNAGEYRAYYETGYKTDVDRIVISGKTVTFSRGKDSVTGDYETDGHEILTYKKGNRGVRFIFRKSAGDDAAP
QFIQFSDHIVAPEKADHYHLYWGNDRAALLNEVTNWPTYYPSSLSGKQIAEEMLSH
>Mature_215_residues
TTLSYALAVSATLTFAGMAGAGTSSGNNHNHSHTHDEKGSVYDGCFDDDLVKARELSDWEGDWQSVYPYLVDGTLDPVMG
DKAKRGDKNAGEYRAYYETGYKTDVDRIVISGKTVTFSRGKDSVTGDYETDGHEILTYKKGNRGVRFIFRKSAGDDAAPQ
FIQFSDHIVAPEKADHYHLYWGNDRAALLNEVTNWPTYYPSSLSGKQIAEEMLSH

Specific function: May Be Involved In Stress Response. [C]

COG id: COG3443

COG function: function code R; Predicted periplasmic or secreted protein

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. YodA family [H]

Homologues:

Organism=Escherichia coli, GI1788284, Length=218, Percent_Identity=44.954128440367, Blast_Score=186, Evalue=8e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR015304 [H]

Pfam domain/function: PF09223 YodA [H]

EC number: NA

Molecular weight: Translated: 23984; Mature: 23853

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLSYALAVSATLTFAGMAGAGTSSGNNHNHSHTHDEKGSVYDGCFDDDLVKARELSDW
CCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHCCCC
EGDWQSVYPYLVDGTLDPVMGDKAKRGDKNAGEYRAYYETGYKTDVDRIVISGKTVTFSR
CCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCEEEEEC
GKDSVTGDYETDGHEILTYKKGNRGVRFIFRKSAGDDAAPQFIQFSDHIVAPEKADHYHL
CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEECCCCEECCCCCCEEEE
YWGNDRAALLNEVTNWPTYYPSSLSGKQIAEEMLSH
EECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TTLSYALAVSATLTFAGMAGAGTSSGNNHNHSHTHDEKGSVYDGCFDDDLVKARELSDW
CCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHCCCC
EGDWQSVYPYLVDGTLDPVMGDKAKRGDKNAGEYRAYYETGYKTDVDRIVISGKTVTFSR
CCCHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCEEEEEC
GKDSVTGDYETDGHEILTYKKGNRGVRFIFRKSAGDDAAPQFIQFSDHIVAPEKADHYHL
CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEECCCCEECCCCCCEEEE
YWGNDRAALLNEVTNWPTYYPSSLSGKQIAEEMLSH
EECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]