| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is glcG [C]
Identifier: 86360888
GI number: 86360888
Start: 166623
End: 167069
Strand: Direct
Name: glcG [C]
Synonym: RHE_PF00157
Alternate gene names: 86360888
Gene position: 166623-167069 (Clockwise)
Preceding gene: 86360887
Following gene: 86360889
Centisome position: 25.93
GC content: 65.32
Gene sequence:
>447_bases ATGAGCACTGCACCCGAATTCACGAAATCGATTTCGACGGCCTCGATCAACCGCCAGGCCGCGGCCGCCCTCATCGAGGC TGCTTTGGCCGCGGCCCGCGACATCGGCATCGAGGCGGCCGTGGCGGTCACCGATGCGACCGGCAATCTGCGCGCTTTCG AGCGAACGGACGGCGCGCCATTTCTGACGGTGGACGTCGCTATCGACAAGGCTTGGACCGCCTCGTCCTTCGGCTTCGCA ACCCACGTCTGGAACGACTACGTGACCGGCGATCCGAAGGTTGCACCGCTTGCGCACCGGCCGCGCATGGTGGCCGTCGG GGGCGGCTATCCGATCCTCGAGGATGGAAGGCTGATCGGCGGTATCGGGATTTCCGGAGGCAACTACCAGCAGGACCAGG ATGCCGCTGTCGCCGCATTGCGCCAGCTGGGTTTTGAAGTGGCCTAG
Upstream 100 bases:
>100_bases GGTAGTGATCGAGGGTTTCGGGCTGCAACGCTGATCCACGCTCCACGTCTTTTCGAACAAATCCAAGAAAGTCGAACGAC CCCTCATCAAGGAGGCTCGC
Downstream 100 bases:
>100_bases GACCCTCGCAACCACCAGCTCCGGCCACCTTGCGCCAAGGTGGGTTGCCGGAAATCTGCGGCGGACCGCAAGGGTTCGCA ATCACTCTCATCCGCAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSTAPEFTKSISTASINRQAAAALIEAALAAARDIGIEAAVAVTDATGNLRAFERTDGAPFLTVDVAIDKAWTASSFGFA THVWNDYVTGDPKVAPLAHRPRMVAVGGGYPILEDGRLIGGIGISGGNYQQDQDAAVAALRQLGFEVA
Sequences:
>Translated_148_residues MSTAPEFTKSISTASINRQAAAALIEAALAAARDIGIEAAVAVTDATGNLRAFERTDGAPFLTVDVAIDKAWTASSFGFA THVWNDYVTGDPKVAPLAHRPRMVAVGGGYPILEDGRLIGGIGISGGNYQQDQDAAVAALRQLGFEVA >Mature_147_residues STAPEFTKSISTASINRQAAAALIEAALAAARDIGIEAAVAVTDATGNLRAFERTDGAPFLTVDVAIDKAWTASSFGFAT HVWNDYVTGDPKVAPLAHRPRMVAVGGGYPILEDGRLIGGIGISGGNYQQDQDAAVAALRQLGFEVA
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 15317; Mature: 15186
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAPEFTKSISTASINRQAAAALIEAALAAARDIGIEAAVAVTDATGNLRAFERTDGAP CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCC FLTVDVAIDKAWTASSFGFATHVWNDYVTGDPKVAPLAHRPRMVAVGGGYPILEDGRLIG EEEEEEEECCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCEEEE GIGISGGNYQQDQDAAVAALRQLGFEVA EEECCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure STAPEFTKSISTASINRQAAAALIEAALAAARDIGIEAAVAVTDATGNLRAFERTDGAP CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCC FLTVDVAIDKAWTASSFGFATHVWNDYVTGDPKVAPLAHRPRMVAVGGGYPILEDGRLIG EEEEEEEECCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCEEEE GIGISGGNYQQDQDAAVAALRQLGFEVA EEECCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA