| Definition | Rhizobium etli CFN 42 plasmid p42f, complete sequence. |
|---|---|
| Accession | NC_007766 |
| Length | 642,517 |
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The map label for this gene is imuA [H]
Identifier: 86360881
GI number: 86360881
Start: 158573
End: 159334
Strand: Direct
Name: imuA [H]
Synonym: RHE_PF00150
Alternate gene names: 86360881
Gene position: 158573-159334 (Clockwise)
Preceding gene: 86360879
Following gene: 86360882
Centisome position: 24.68
GC content: 65.88
Gene sequence:
>762_bases ATGACCACATCAGTCGCCACTTCGAATGCCGTTCTCGACGAGTTGCGCGAGAAAATCGCCAGCCTGGAAGGAGCGGGCTC GCGCCGTCGCAGTGTGCTTCCGTTTGGGGTTGGCGAGATCGATGCGCAGCTGCCCGGAGGTGGCCTGGCCTTTGGTGCCC TGCACGAAGTCGCCGGCGGCGGGAACGATGCGATCGACGGCGCGGCCGCGGCGCTCTTCATCGGCGGCATCGCGGCCCGG ACCACCGGCAAGGTGGTCTGGTGCCTCACCCGCTTCGATCTGTTCTTTCCAGCACTTGCCCAGGTGGGACTTCACCCCGA TCGCGTCATCTTCGTCGAATGCGACAAGGAAGAGACGGTGCTCGCAAGCTTCGAAGAGGCGTTGCGGTATGGCGGCCTCG GCGCCGTCGTCGCCGAACTGGTGCGCCTGCCGATGACGGCTTCGCGCCGGCTGCAGCTTGCGGCGGAAAAGTCGGGCACG TTAGGCCTGGTGATCCGCCGATGGCGGCGCCAGACGGAAGCCTCCGATTTCGGCATGCCGACGGCAGCTGTAACCCGTTG GCGGATCTCGGTGCTGCCGTCCGAGCCGCTCCCCGTGCCGGGCGTCGGCCGCGCGCGCTGGCTGGCAGAACTGATGCGGG TCAGGGCAGGCGAGGGAGGAGAATTCATTATCGGAGCATGTGATGGCAAGGGTCGTATCTGTCTTTCTTCCGACACTGCC GACCGACCGGATCAGGCGCGCCGATCCTTCGCTATCTCCTGA
Upstream 100 bases:
>100_bases CTTGAACGCGTCCGGCGCGCATTGACTCGTTTTTGCTTTGAGAACAAATAAAGAACATATCGCATTTTCGCAAGTCAAGA CGGGTTGCCGTAAGGAGATC
Downstream 100 bases:
>100_bases CACGCCGCTGGTGGTGATCGCCAGGAGCGGGTCGAAGCGATGGGTGGCGGCGGCCGACGGGGCAGCGCACAAACGGGGCT TGCGCGTCGGCATGCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTTSVATSNAVLDELREKIASLEGAGSRRRSVLPFGVGEIDAQLPGGGLAFGALHEVAGGGNDAIDGAAAALFIGGIAAR TTGKVVWCLTRFDLFFPALAQVGLHPDRVIFVECDKEETVLASFEEALRYGGLGAVVAELVRLPMTASRRLQLAAEKSGT LGLVIRRWRRQTEASDFGMPTAAVTRWRISVLPSEPLPVPGVGRARWLAELMRVRAGEGGEFIIGACDGKGRICLSSDTA DRPDQARRSFAIS
Sequences:
>Translated_253_residues MTTSVATSNAVLDELREKIASLEGAGSRRRSVLPFGVGEIDAQLPGGGLAFGALHEVAGGGNDAIDGAAAALFIGGIAAR TTGKVVWCLTRFDLFFPALAQVGLHPDRVIFVECDKEETVLASFEEALRYGGLGAVVAELVRLPMTASRRLQLAAEKSGT LGLVIRRWRRQTEASDFGMPTAAVTRWRISVLPSEPLPVPGVGRARWLAELMRVRAGEGGEFIIGACDGKGRICLSSDTA DRPDQARRSFAIS >Mature_252_residues TTSVATSNAVLDELREKIASLEGAGSRRRSVLPFGVGEIDAQLPGGGLAFGALHEVAGGGNDAIDGAAAALFIGGIAART TGKVVWCLTRFDLFFPALAQVGLHPDRVIFVECDKEETVLASFEEALRYGGLGAVVAELVRLPMTASRRLQLAAEKSGTL GLVIRRWRRQTEASDFGMPTAAVTRWRISVLPSEPLPVPGVGRARWLAELMRVRAGEGGEFIIGACDGKGRICLSSDTAD RPDQARRSFAIS
Specific function: Along with dnaE2 and imuB is required for the error- prone processing of DNA lesions [H]
COG id: COG4544
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017026 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26847; Mature: 26716
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSVATSNAVLDELREKIASLEGAGSRRRSVLPFGVGEIDAQLPGGGLAFGALHEVAGG CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC GNDAIDGAAAALFIGGIAARTTGKVVWCLTRFDLFFPALAQVGLHPDRVIFVECDKEETV CCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHH LASFEEALRYGGLGAVVAELVRLPMTASRRLQLAAEKSGTLGLVIRRWRRQTEASDFGMP HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHEEEECCCCCCHHHHHHHHHHHCCCHHCCCC TAAVTRWRISVLPSEPLPVPGVGRARWLAELMRVRAGEGGEFIIGACDGKGRICLSSDTA HHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCC DRPDQARRSFAIS CCCHHHHHHCCCC >Mature Secondary Structure TTSVATSNAVLDELREKIASLEGAGSRRRSVLPFGVGEIDAQLPGGGLAFGALHEVAGG CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC GNDAIDGAAAALFIGGIAARTTGKVVWCLTRFDLFFPALAQVGLHPDRVIFVECDKEETV CCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHH LASFEEALRYGGLGAVVAELVRLPMTASRRLQLAAEKSGTLGLVIRRWRRQTEASDFGMP HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHEEEECCCCCCHHHHHHHHHHHCCCHHCCCC TAAVTRWRISVLPSEPLPVPGVGRARWLAELMRVRAGEGGEFIIGACDGKGRICLSSDTA HHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCC DRPDQARRSFAIS CCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA