Definition Rhizobium etli CFN 42 plasmid p42f, complete sequence.
Accession NC_007766
Length 642,517

Click here to switch to the map view.

The map label for this gene is 86360879

Identifier: 86360879

GI number: 86360879

Start: 156561

End: 157055

Strand: Direct

Name: 86360879

Synonym: RHE_PF00148

Alternate gene names: NA

Gene position: 156561-157055 (Clockwise)

Preceding gene: 86360877

Following gene: 86360881

Centisome position: 24.37

GC content: 65.25

Gene sequence:

>495_bases
ATGAACGCGACCGCTTTCCAGTCCGATGCCCCGCTCGACGAGCGCCGTGTCATCATCAGGCGCCATGACGGCGATGTGGA
GATGGTGGAGCTGCCATGGGGGCTGCGACCCCGCGACGGCGGCCCGCGCGCCGTTAACGTCGTCCGATCGGAAGGGCGGA
CATTCCCGAGCTACCGCTGCCTGGTGCCGGCTTCGGAGTTTCGCCACAAGAGCTTCAGCTTTTCACTCGCCAACGGCGAC
TGGTTCTATTTCGCGGGAATCTGGCGCCCGGCGACTGAGGATTGGCCGGAGGCCTATGCCATCCTGACCATCGAGGCGAA
TGCCGACATCGCGCCTATTCACGATCGGCAGATGGCGGTGCTGACACGCGACCAGCGCATAGACTGGCTCAATGGAGTTG
TCCCCGAAGAGGAAATCCTGCGGCCGCTGCCGGCGGGCACCTTCCGGGTCAAGCGCCGCGCCTGCGAGCCTGCCCAGCCG
ATGCTCGCGATCTAA

Upstream 100 bases:

>100_bases
TCACCGGCGCGCATGCACGGAGTTTAGCAGTTCAGCGAACCGAACAGGATTATCCATCAGCCTTGTCTAATGTGCTCGTT
CCTGATATGTTCCATCCATA

Downstream 100 bases:

>100_bases
AGCGCCAACCGCAGTTGCGGTTCCGTTCCGGCGGCGCGCCTTTCGAGCGACGACAGCGAGACGCCAAGCAGGCGAATGCC
CTTTCGGGGCGGAAAGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNATAFQSDAPLDERRVIIRRHDGDVEMVELPWGLRPRDGGPRAVNVVRSEGRTFPSYRCLVPASEFRHKSFSFSLANGD
WFYFAGIWRPATEDWPEAYAILTIEANADIAPIHDRQMAVLTRDQRIDWLNGVVPEEEILRPLPAGTFRVKRRACEPAQP
MLAI

Sequences:

>Translated_164_residues
MNATAFQSDAPLDERRVIIRRHDGDVEMVELPWGLRPRDGGPRAVNVVRSEGRTFPSYRCLVPASEFRHKSFSFSLANGD
WFYFAGIWRPATEDWPEAYAILTIEANADIAPIHDRQMAVLTRDQRIDWLNGVVPEEEILRPLPAGTFRVKRRACEPAQP
MLAI
>Mature_164_residues
MNATAFQSDAPLDERRVIIRRHDGDVEMVELPWGLRPRDGGPRAVNVVRSEGRTFPSYRCLVPASEFRHKSFSFSLANGD
WFYFAGIWRPATEDWPEAYAILTIEANADIAPIHDRQMAVLTRDQRIDWLNGVVPEEEILRPLPAGTFRVKRRACEPAQP
MLAI

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18716; Mature: 18716

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATAFQSDAPLDERRVIIRRHDGDVEMVELPWGLRPRDGGPRAVNVVRSEGRTFPSYRC
CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEE
LVPASEFRHKSFSFSLANGDWFYFAGIWRPATEDWPEAYAILTIEANADIAPIHDRQMAV
EECHHHHCCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEE
LTRDQRIDWLNGVVPEEEILRPLPAGTFRVKRRACEPAQPMLAI
EECCCCCHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCCEECC
>Mature Secondary Structure
MNATAFQSDAPLDERRVIIRRHDGDVEMVELPWGLRPRDGGPRAVNVVRSEGRTFPSYRC
CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCEEE
LVPASEFRHKSFSFSLANGDWFYFAGIWRPATEDWPEAYAILTIEANADIAPIHDRQMAV
EECHHHHCCCEEEEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEE
LTRDQRIDWLNGVVPEEEILRPLPAGTFRVKRRACEPAQPMLAI
EECCCCCHHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA