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The map label for this gene is yurN [H]

Identifier: 86360782

GI number: 86360782

Start: 50263

End: 51201

Strand: Direct

Name: yurN [H]

Synonym: RHE_PF00048

Alternate gene names: 86360782

Gene position: 50263-51201 (Clockwise)

Preceding gene: 86360781

Following gene: 86360783

Centisome position: 7.82

GC content: 61.45

Gene sequence:

>939_bases
ATGACCATGCAACAAGCAACATCGTCATCATCCGTCCGAAAGGCTCCGGCGCGCCGGCATGACACGGGACGACTGATGCA
GGAAACGGCGATGCTCGCGCCGGCCGTGATCCTTTTGACAGTGTTTCTGATCGTGCCGTTCTTCCTGTCCTTCTGGACGG
CGATGACCAACCAGCCCCTGGTGCCGCGCCCGACGCCGGTCCGCTTCGTCTGGTTCAACAATTTCCTCCGCATCTTCCAG
GACGATCTGTTCTGGACCGCCCTCTGGAACGTCTCGCGCTTCACCTTCTGGATCATCCCGGCGCAGTGCGGCCTCGCTTT
CGCGACCGCGCTGCTGCTTCATCAGAAGCTGCCGTTGCGCAATCTGCTGCGCGGCATGTTCTTCCTGCCGGCGATTACTT
CCATGGTCGTGGTCTGCGTCATCTGGGGCACCCTGTTCCAATATCCGACGGGGCCGTTCAACCAGATCCTTGGCTTCCTC
TCGGGCGGCGCGATCCAGCCGATCGACTGGCTCGGCGATCCCCAATGGGCGATGTTCTCGCTCGTCCTGCTCTCGGCCTG
GCAGGCCTACGGTTTCCAGATGATCGTCTACCTCGCCGGTCTCCAGGGCATTCCCGACGAACTCTACGATGCCGCCAAGA
TCGACGGTGCGAACGCCTTCCGGCGTTTCTGGCACGTCACGATGCCAGGCTTGCGGCCGACCCATGTCTTCGTGCTTGTC
ATCACCACCATCCAGGCGTTCAAGCTCTATACCCAGGTCGCCATCCTCACGCAGGGCGGGCCGAAGAGCAGCACCGAAAC
CGTGGTGCATTATATGGTCCGGGCCGGTTTCGAGGAGCAGAAGATGGGTTATGCCTCCGCCGTCTCGGTCATCCTGTTCG
TCATCGTTCTCGTCATCGCGCTGATCCAGCGCCAGCTCCTGAGGCGCTTCGATGTCTGA

Upstream 100 bases:

>100_bases
TATCCGCCGTTTGGCGAAGAGTAATAGACGTGATCGCCCTGCAAGTCCCCGCCTGATATTGCAGGGCGAACACCGGCATC
CGGCTGGAGAGGAGGAGCCA

Downstream 100 bases:

>100_bases
TCTCGCTCTCTCGATCCCTGAGGCCCGCACCGCACGACCCCGCTCCGCCGCCAGGGTCCTGCGCACCGTCCAGACCGTCT
GCATCTTCATCATCGCATTG

Product: sucrose ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTMQQATSSSSVRKAPARRHDTGRLMQETAMLAPAVILLTVFLIVPFFLSFWTAMTNQPLVPRPTPVRFVWFNNFLRIFQ
DDLFWTALWNVSRFTFWIIPAQCGLAFATALLLHQKLPLRNLLRGMFFLPAITSMVVVCVIWGTLFQYPTGPFNQILGFL
SGGAIQPIDWLGDPQWAMFSLVLLSAWQAYGFQMIVYLAGLQGIPDELYDAAKIDGANAFRRFWHVTMPGLRPTHVFVLV
ITTIQAFKLYTQVAILTQGGPKSSTETVVHYMVRAGFEEQKMGYASAVSVILFVIVLVIALIQRQLLRRFDV

Sequences:

>Translated_312_residues
MTMQQATSSSSVRKAPARRHDTGRLMQETAMLAPAVILLTVFLIVPFFLSFWTAMTNQPLVPRPTPVRFVWFNNFLRIFQ
DDLFWTALWNVSRFTFWIIPAQCGLAFATALLLHQKLPLRNLLRGMFFLPAITSMVVVCVIWGTLFQYPTGPFNQILGFL
SGGAIQPIDWLGDPQWAMFSLVLLSAWQAYGFQMIVYLAGLQGIPDELYDAAKIDGANAFRRFWHVTMPGLRPTHVFVLV
ITTIQAFKLYTQVAILTQGGPKSSTETVVHYMVRAGFEEQKMGYASAVSVILFVIVLVIALIQRQLLRRFDV
>Mature_311_residues
TMQQATSSSSVRKAPARRHDTGRLMQETAMLAPAVILLTVFLIVPFFLSFWTAMTNQPLVPRPTPVRFVWFNNFLRIFQD
DLFWTALWNVSRFTFWIIPAQCGLAFATALLLHQKLPLRNLLRGMFFLPAITSMVVVCVIWGTLFQYPTGPFNQILGFLS
GGAIQPIDWLGDPQWAMFSLVLLSAWQAYGFQMIVYLAGLQGIPDELYDAAKIDGANAFRRFWHVTMPGLRPTHVFVLVI
TTIQAFKLYTQVAILTQGGPKSSTETVVHYMVRAGFEEQKMGYASAVSVILFVIVLVIALIQRQLLRRFDV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=247, Percent_Identity=29.5546558704453, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1789861, Length=276, Percent_Identity=26.8115942028986, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1790465, Length=260, Percent_Identity=27.6923076923077, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35330; Mature: 35199

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMQQATSSSSVRKAPARRHDTGRLMQETAMLAPAVILLTVFLIVPFFLSFWTAMTNQPL
CCCCHHCCCHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VPRPTPVRFVWFNNFLRIFQDDLFWTALWNVSRFTFWIIPAQCGLAFATALLLHQKLPLR
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHCCCHH
NLLRGMFFLPAITSMVVVCVIWGTLFQYPTGPFNQILGFLSGGAIQPIDWLGDPQWAMFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHH
LVLLSAWQAYGFQMIVYLAGLQGIPDELYDAAKIDGANAFRRFWHVTMPGLRPTHVFVLV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHH
ITTIQAFKLYTQVAILTQGGPKSSTETVVHYMVRAGFEEQKMGYASAVSVILFVIVLVIA
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LIQRQLLRRFDV
HHHHHHHHHCCC
>Mature Secondary Structure 
TMQQATSSSSVRKAPARRHDTGRLMQETAMLAPAVILLTVFLIVPFFLSFWTAMTNQPL
CCCHHCCCHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC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HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]