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The map label for this gene is bioY [H]

Identifier: 85860939

GI number: 85860939

Start: 3107397

End: 3107942

Strand: Direct

Name: bioY [H]

Synonym: SYN_00210

Alternate gene names: 85860939

Gene position: 3107397-3107942 (Clockwise)

Preceding gene: 85860938

Following gene: 85860940

Centisome position: 97.74

GC content: 57.14

Gene sequence:

>546_bases
ATGAATAAATCAGGACGCACCGCATCCCCTCTGCTCGGGATGATCTATGCCTCTCTTTTCGGAGCCATGACGGCCGTCGG
TGCCTTTATCATGATTCCCCTGCCGCTGGTGCCGATCACCCTGCAGAATTTCTTCCTGGCCCTGGCCGCGGCCCTGCTCG
GAGGACCCTTGGGCGCTTTGAGTCAGATCGTTTATGTGGCGCTGGGATTGATCGGTCTGCCCGTCTTTGCCGGTGGGAAG
GCCGGATTGGGGGTTCTGCTGGGACCGACTGGCGGATACCTCTTGGGCTTTATTGCCGGCGCCTGGATCATCGGCATCCT
GGCCGGCATGAAAGAACGACCGGGAATAGTCTGGCTGTCGTTCACCATGATTCTGGGACATCTCGTCATCTATGGCATAG
GAACCGCTCAGCTCGCCTTTGTGGCGAAACTTTCCCCGGCCCAGGCTCTGGCCGTCGGTGTTTTTCCTTTTATTCCGGGT
GATATCGTCAAGATTCTTGCCGCCTCCCTGATTGTCCTGAAGGTCCGCAATTACATACAGCGATAA

Upstream 100 bases:

>100_bases
TTCTGATCCTGAAGGAATCCGACGGGGCCCTTCAGCGGATTTTTTCCGGAGATGTGACCCTCCTCACGGTCTGACGGCGG
GATGTAAGAGGAACAAAATA

Downstream 100 bases:

>100_bases
CCGGCAGGGGATAGCAGTTCAGATTAAAGATGATTTCAAGACGGGCAGAGGCGGCCCAGGCACGCAAACGAAGTACGTTG
ATGAGCCGATGAAGGATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNKSGRTASPLLGMIYASLFGAMTAVGAFIMIPLPLVPITLQNFFLALAAALLGGPLGALSQIVYVALGLIGLPVFAGGK
AGLGVLLGPTGGYLLGFIAGAWIIGILAGMKERPGIVWLSFTMILGHLVIYGIGTAQLAFVAKLSPAQALAVGVFPFIPG
DIVKILAASLIVLKVRNYIQR

Sequences:

>Translated_181_residues
MNKSGRTASPLLGMIYASLFGAMTAVGAFIMIPLPLVPITLQNFFLALAAALLGGPLGALSQIVYVALGLIGLPVFAGGK
AGLGVLLGPTGGYLLGFIAGAWIIGILAGMKERPGIVWLSFTMILGHLVIYGIGTAQLAFVAKLSPAQALAVGVFPFIPG
DIVKILAASLIVLKVRNYIQR
>Mature_181_residues
MNKSGRTASPLLGMIYASLFGAMTAVGAFIMIPLPLVPITLQNFFLALAAALLGGPLGALSQIVYVALGLIGLPVFAGGK
AGLGVLLGPTGGYLLGFIAGAWIIGILAGMKERPGIVWLSFTMILGHLVIYGIGTAQLAFVAKLSPAQALAVGVFPFIPG
DIVKILAASLIVLKVRNYIQR

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 18630; Mature: 18630

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSGRTASPLLGMIYASLFGAMTAVGAFIMIPLPLVPITLQNFFLALAAALLGGPLGAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SQIVYVALGLIGLPVFAGGKAGLGVLLGPTGGYLLGFIAGAWIIGILAGMKERPGIVWLS
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
FTMILGHLVIYGIGTAQLAFVAKLSPAQALAVGVFPFIPGDIVKILAASLIVLKVRNYIQ
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure
MNKSGRTASPLLGMIYASLFGAMTAVGAFIMIPLPLVPITLQNFFLALAAALLGGPLGAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SQIVYVALGLIGLPVFAGGKAGLGVLLGPTGGYLLGFIAGAWIIGILAGMKERPGIVWLS
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
FTMILGHLVIYGIGTAQLAFVAKLSPAQALAVGVFPFIPGDIVKILAASLIVLKVRNYIQ
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2110099; 2507401 [H]