| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is mnmG [H]
Identifier: 85860875
GI number: 85860875
Start: 3036923
End: 3038908
Strand: Direct
Name: mnmG [H]
Synonym: SYN_01650
Alternate gene names: 85860875
Gene position: 3036923-3038908 (Clockwise)
Preceding gene: 85860873
Following gene: 85860880
Centisome position: 95.52
GC content: 54.53
Gene sequence:
>1986_bases ATGCAGAAAAGTCAGCTGACGAAAGGCGATTGGATAGAACTTCCAGATTACCGGAGAAAGGCGCAAATGAGGCAATTTGA TGTCATTGTCGTGGGGGCAGGCCATGCCGGTTGTGAGGCGGCGCTGGCAGCATCCCGCATGGGTTGTGAAACCCTTCTTT TCAATATCAATCTGGATTCCATTGCCCTGATGTCGTGCAACCCCGCAATCGGTGGGCTGGCAAAAGGACAGCTCGTCAAG GAAATCGATGCCCTGGGCGGTGAGATGGGCAGGATGGCGGACAAAACGGCCGTTCATTTCCGCATCCTTAACGCATCCAA GGGACCGGCGGTACAGTCGTCGCGGGTTCAGTGCGACAAACAGCTTTACCGGCTCGCCATGAAGTCCGTGGTCGAACGGC AGCCAAAACTTCATCTTTTTCAAAGCCTGGTTGACTGCCTTCTTGTCAAAGACGGCCAGATCACCGGCGTGGCAGATCAG ACCGGCGTTTGTTTCGGCGCGAAAGCCGTGGTCATCACCACGGGCACGTTTCTCAACGGGCTGGTTCATGTCGGAACATC ACATTATCCGGCGGGACGTGCCGGGGAAATCGCTTCCATTTCTCTGGCGAATTGCCTTCGCAAAATGGGCTTCGAAATGG GCAGGATGAAGACCGGAACGCCGCCACGGTTGAAGGCGTCTACAATTGACTTTTCCCGTCTCGAAAGGCAGGACAGCGAT CCCGCCTTCGAACCCTTTTCCCTGTCCACGGAACGCCTGGGAAAAGAACGGCTTCCCTCCTACTTCGGCTATACAACTTC AGAAACACATCGCCTGATCCGGGATAATATCCGTTTTTCACCCCTCTATTCCGGAGTCATCAAGGGAGTCAGCGCACGTT ACTGTCCATCCCTGGAGGATAAGGTGATGCGTTTTGCCGACAAGGGACGTCATCCCGTGGTTCTTGAATTTGAAGGATTG GAAACGGAAGAGGTCTATGCCAAAGGCCTGGGAAACAGCCTTCCTCTGGACCTACAGGAACAAATCGTTCACAGCGTGCC GGGACTGGAAAATTCGGAAATTCTGCGATCGGCCTATGCCATTGAATACGACTTCGTCCAGCCGACTCAACTTAATCACA CATTGGAAACCAAAAGGGTTCGTGGGCTTTACCTGGCCGGTCAGATCAACGGCACGTCCGGATACGAAGAAGCAGCCGCT CAGGGGATGTGGGCGGGCATCAATGCCGCCCTGGCGGTGCAGGGCCGTCCGCCCTTCGTGCTCGATCGCTCGGAAGCCTA TATGGGGGTTTTGATAGATGATCTCGTGACCCAGGGCGTGGATGAACCCTACCGGATGTTTACCTCCAGAGCGGAATACC GGCTGATCCTGCGTGAAGACAATGCCGCACTGCGCCTGACTCCCCGGGGTTTTGATCTGGGGTTGATCCCTCAGGATCTT CATGAGCAGATTTCCGAGAGAATCCGCCGGATTGAAGAAGGGATGAAATGTCTTTCCTCTTTCAAGATCTATCCCGGCAC CGCCGTCAATTCGAAACTGGAGGAACATGGAAGTCCAGCGATCAAAAATCCGGTAACGCTGTTTCAGCTTCTCAAACGCA CGGACCTTTCCTGGGAGGATCTGTCGATGTTTCAGGATCTTCCGGATTTTCCGGAAGATGTACCGGACGGCTACGACCGG ATGATCCGGAAGCAGATCGAAATCGAAGCCAAATATGAAGGGTACATTCAGCGTCAGCGGGAAGCCGTTGTCCGGATGAA AGCACTGGAAAGCCGCAGAATTCCGCCGGGAATGGATTATTCGGCCATTCCCGGTTTGTCCAATGAGTTGCGGATGAAAC TGGCCCGAGTGGAGCCGGAAACCATCGGGCAGGCCCGGCGCATCACAGGAATGACTCAGGCCGCTCTGGCCGCGGTCATG ATCATGATCAAAAAAAAAGAACAGGATACCCGGGGACAATCTCCTCTTCCTGCCCAGTCCGAATGA
Upstream 100 bases:
>100_bases ATTGAGAAGATATACCGATCTGTCCTTCCAAAGGATGACGAGTCGGCAAAAAAGAAGCGGTGAAGTCCTATCCGTTTATG AATGAGTCGAAAAGCCGCCG
Downstream 100 bases:
>100_bases AGGGAAAAATCCTCATGAACCTTTTTCTGAATGGATGGTGACAGTGTCCAGGAAATATGAGATCCAATTTCTTTCACCCT GATTGTGCTCAAGTTGATCC
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 661; Mature: 661
Protein sequence:
>661_residues MQKSQLTKGDWIELPDYRRKAQMRQFDVIVVGAGHAGCEAALAASRMGCETLLFNINLDSIALMSCNPAIGGLAKGQLVK EIDALGGEMGRMADKTAVHFRILNASKGPAVQSSRVQCDKQLYRLAMKSVVERQPKLHLFQSLVDCLLVKDGQITGVADQ TGVCFGAKAVVITTGTFLNGLVHVGTSHYPAGRAGEIASISLANCLRKMGFEMGRMKTGTPPRLKASTIDFSRLERQDSD PAFEPFSLSTERLGKERLPSYFGYTTSETHRLIRDNIRFSPLYSGVIKGVSARYCPSLEDKVMRFADKGRHPVVLEFEGL ETEEVYAKGLGNSLPLDLQEQIVHSVPGLENSEILRSAYAIEYDFVQPTQLNHTLETKRVRGLYLAGQINGTSGYEEAAA QGMWAGINAALAVQGRPPFVLDRSEAYMGVLIDDLVTQGVDEPYRMFTSRAEYRLILREDNAALRLTPRGFDLGLIPQDL HEQISERIRRIEEGMKCLSSFKIYPGTAVNSKLEEHGSPAIKNPVTLFQLLKRTDLSWEDLSMFQDLPDFPEDVPDGYDR MIRKQIEIEAKYEGYIQRQREAVVRMKALESRRIPPGMDYSAIPGLSNELRMKLARVEPETIGQARRITGMTQAALAAVM IMIKKKEQDTRGQSPLPAQSE
Sequences:
>Translated_661_residues MQKSQLTKGDWIELPDYRRKAQMRQFDVIVVGAGHAGCEAALAASRMGCETLLFNINLDSIALMSCNPAIGGLAKGQLVK EIDALGGEMGRMADKTAVHFRILNASKGPAVQSSRVQCDKQLYRLAMKSVVERQPKLHLFQSLVDCLLVKDGQITGVADQ TGVCFGAKAVVITTGTFLNGLVHVGTSHYPAGRAGEIASISLANCLRKMGFEMGRMKTGTPPRLKASTIDFSRLERQDSD PAFEPFSLSTERLGKERLPSYFGYTTSETHRLIRDNIRFSPLYSGVIKGVSARYCPSLEDKVMRFADKGRHPVVLEFEGL ETEEVYAKGLGNSLPLDLQEQIVHSVPGLENSEILRSAYAIEYDFVQPTQLNHTLETKRVRGLYLAGQINGTSGYEEAAA QGMWAGINAALAVQGRPPFVLDRSEAYMGVLIDDLVTQGVDEPYRMFTSRAEYRLILREDNAALRLTPRGFDLGLIPQDL HEQISERIRRIEEGMKCLSSFKIYPGTAVNSKLEEHGSPAIKNPVTLFQLLKRTDLSWEDLSMFQDLPDFPEDVPDGYDR MIRKQIEIEAKYEGYIQRQREAVVRMKALESRRIPPGMDYSAIPGLSNELRMKLARVEPETIGQARRITGMTQAALAAVM IMIKKKEQDTRGQSPLPAQSE >Mature_661_residues MQKSQLTKGDWIELPDYRRKAQMRQFDVIVVGAGHAGCEAALAASRMGCETLLFNINLDSIALMSCNPAIGGLAKGQLVK EIDALGGEMGRMADKTAVHFRILNASKGPAVQSSRVQCDKQLYRLAMKSVVERQPKLHLFQSLVDCLLVKDGQITGVADQ TGVCFGAKAVVITTGTFLNGLVHVGTSHYPAGRAGEIASISLANCLRKMGFEMGRMKTGTPPRLKASTIDFSRLERQDSD PAFEPFSLSTERLGKERLPSYFGYTTSETHRLIRDNIRFSPLYSGVIKGVSARYCPSLEDKVMRFADKGRHPVVLEFEGL ETEEVYAKGLGNSLPLDLQEQIVHSVPGLENSEILRSAYAIEYDFVQPTQLNHTLETKRVRGLYLAGQINGTSGYEEAAA QGMWAGINAALAVQGRPPFVLDRSEAYMGVLIDDLVTQGVDEPYRMFTSRAEYRLILREDNAALRLTPRGFDLGLIPQDL HEQISERIRRIEEGMKCLSSFKIYPGTAVNSKLEEHGSPAIKNPVTLFQLLKRTDLSWEDLSMFQDLPDFPEDVPDGYDR MIRKQIEIEAKYEGYIQRQREAVVRMKALESRRIPPGMDYSAIPGLSNELRMKLARVEPETIGQARRITGMTQAALAAVM IMIKKKEQDTRGQSPLPAQSE
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=639, Percent_Identity=39.906103286385, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI19882217, Length=664, Percent_Identity=38.4036144578313, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI183227703, Length=679, Percent_Identity=37.5552282768778, Blast_Score=427, Evalue=1e-119, Organism=Escherichia coli, GI2367273, Length=622, Percent_Identity=47.7491961414791, Blast_Score=589, Evalue=1e-169, Organism=Caenorhabditis elegans, GI17534255, Length=638, Percent_Identity=39.4984326018809, Blast_Score=450, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6321202, Length=623, Percent_Identity=45.2648475120385, Blast_Score=493, Evalue=1e-140, Organism=Drosophila melanogaster, GI24658174, Length=650, Percent_Identity=40.7692307692308, Blast_Score=446, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 73471; Mature: 73471
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS00217 SUGAR_TRANSPORT_2 ; PS01280 GIDA_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKSQLTKGDWIELPDYRRKAQMRQFDVIVVGAGHAGCEAALAASRMGCETLLFNINLDS CCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCC IALMSCNPAIGGLAKGQLVKEIDALGGEMGRMADKTAVHFRILNASKGPAVQSSRVQCDK EEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHH QLYRLAMKSVVERQPKLHLFQSLVDCLLVKDGQITGVADQTGVCFGAKAVVITTGTFLNG HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCEECCCEEEEECCHHHHH LVHVGTSHYPAGRAGEIASISLANCLRKMGFEMGRMKTGTPPRLKASTIDFSRLERQDSD HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCEECCCCHHHHHCCCCC PAFEPFSLSTERLGKERLPSYFGYTTSETHRLIRDNIRFSPLYSGVIKGVSARYCPSLED CCCCCCCCCHHHHCHHHCCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHCCCCHHH KVMRFADKGRHPVVLEFEGLETEEVYAKGLGNSLPLDLQEQIVHSVPGLENSEILRSAYA HHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH IEYDFVQPTQLNHTLETKRVRGLYLAGQINGTSGYEEAAAQGMWAGINAALAVQGRPPFV EEECCCCCCCCCCHHHHHHCCEEEEEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCCEE LDRSEAYMGVLIDDLVTQGVDEPYRMFTSRAEYRLILREDNAALRLTPRGFDLGLIPQDL EECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCCHHH HEQISERIRRIEEGMKCLSSFKIYPGTAVNSKLEEHGSPAIKNPVTLFQLLKRTDLSWED HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHH LSMFQDLPDFPEDVPDGYDRMIRKQIEIEAKYEGYIQRQREAVVRMKALESRRIPPGMDY HHHHHCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SAIPGLSNELRMKLARVEPETIGQARRITGMTQAALAAVMIMIKKKEQDTRGQSPLPAQS CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC E C >Mature Secondary Structure MQKSQLTKGDWIELPDYRRKAQMRQFDVIVVGAGHAGCEAALAASRMGCETLLFNINLDS CCCCCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCC IALMSCNPAIGGLAKGQLVKEIDALGGEMGRMADKTAVHFRILNASKGPAVQSSRVQCDK EEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHH QLYRLAMKSVVERQPKLHLFQSLVDCLLVKDGQITGVADQTGVCFGAKAVVITTGTFLNG HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCCCEECCCEEEEECCHHHHH LVHVGTSHYPAGRAGEIASISLANCLRKMGFEMGRMKTGTPPRLKASTIDFSRLERQDSD HHHCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCEECCCCHHHHHCCCCC PAFEPFSLSTERLGKERLPSYFGYTTSETHRLIRDNIRFSPLYSGVIKGVSARYCPSLED CCCCCCCCCHHHHCHHHCCHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCHHCCCCHHH KVMRFADKGRHPVVLEFEGLETEEVYAKGLGNSLPLDLQEQIVHSVPGLENSEILRSAYA HHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH IEYDFVQPTQLNHTLETKRVRGLYLAGQINGTSGYEEAAAQGMWAGINAALAVQGRPPFV EEECCCCCCCCCCHHHHHHCCEEEEEEEECCCCCHHHHHHCCCCCCCCEEEEECCCCCEE LDRSEAYMGVLIDDLVTQGVDEPYRMFTSRAEYRLILREDNAALRLTPRGFDLGLIPQDL EECCCHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCEEEECCCCCCCCCCCHHH HEQISERIRRIEEGMKCLSSFKIYPGTAVNSKLEEHGSPAIKNPVTLFQLLKRTDLSWED HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHH LSMFQDLPDFPEDVPDGYDRMIRKQIEIEAKYEGYIQRQREAVVRMKALESRRIPPGMDY HHHHHCCCCCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SAIPGLSNELRMKLARVEPETIGQARRITGMTQAALAAVMIMIKKKEQDTRGQSPLPAQS CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA