| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is fabG [H]
Identifier: 85860832
GI number: 85860832
Start: 2998812
End: 2999552
Strand: Direct
Name: fabG [H]
Synonym: SYN_01696
Alternate gene names: 85860832
Gene position: 2998812-2999552 (Clockwise)
Preceding gene: 85860831
Following gene: 85860833
Centisome position: 94.32
GC content: 51.15
Gene sequence:
>741_bases TTGAACATGAGTCAAGACAAACCAGTTGCCATCATCACCGGAGGAGGTACGGGAATCGGTGCGGCCTGTTCCAGAATTCT TTCCCGGGATGGTTTCCGTGTGGGAATCAATTATATAGATCCAGTAGAGGAGCAGTCCCGTCAGGTTCTTTCTGAGCTTG AAGACGGCTTTCTTCTTAAGGCGGATCTTTCCAATCCGGACGAGATCGAAACCATGATCGCGGAAATCAGAGAAAAGGCG CGTCGCGTGGATGTTCTGGTCAATGGCGCAGGCATATCCATCAATAAAGACATCAACAGCATGACACTCGATGATTTCGA TCTTCAGAGGGCCATCGTCAGGGGAAGCTGGTATCTGACCAAAAGGATCCTCAGGCTTTTCATGCTCCGGAAAAACAGCG GACGCATCATCAACATCTCCAGTGTTGTCGGTCATACCGGTAACTCCGGCCAGATTCCCTACACAATGGAAAAAGCCGCC TTGGACGCCTTTACGAAGTCGCTATGCAAGGAACTTGCAGGGAGAAACATCCTGGTTAATTCCGTCGCCCCGGGGTTCAT CGACACACCGATGACCCAGAATCTGCCGGATGAAGTTAAAAGCCGCATTCTGGGAAGCATTCCTCTGGGCCGTCTTGGAT CGCCGGAAGAGATCGCCGATTTGGTTTCCTTTCTTGCCTGCAGGGCTTCGTATATTTCAGGAACGGTCATTCATGTGAAC GGAGGCCTGTATGGTGGCTGA
Upstream 100 bases:
>100_bases TCACGGAAATTACCCAGGCCCAGACCGGTGTTTTCAGTGGCATTGTTTATCCGGATTATCCAAAACACTCCCGCAATTCA GTGGGAGGAATGATCAGGAG
Downstream 100 bases:
>100_bases TCAGGAAACAATGGACCTCATTCTCAACGCGGTTCCACAAAAACATCCCTTTCGATTCATCGATGAGATTATCGAACTGG ACGATGATCACATTGTGGGT
Product: 3-oxoacyl- reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MNMSQDKPVAIITGGGTGIGAACSRILSRDGFRVGINYIDPVEEQSRQVLSELEDGFLLKADLSNPDEIETMIAEIREKA RRVDVLVNGAGISINKDINSMTLDDFDLQRAIVRGSWYLTKRILRLFMLRKNSGRIINISSVVGHTGNSGQIPYTMEKAA LDAFTKSLCKELAGRNILVNSVAPGFIDTPMTQNLPDEVKSRILGSIPLGRLGSPEEIADLVSFLACRASYISGTVIHVN GGLYGG
Sequences:
>Translated_246_residues MNMSQDKPVAIITGGGTGIGAACSRILSRDGFRVGINYIDPVEEQSRQVLSELEDGFLLKADLSNPDEIETMIAEIREKA RRVDVLVNGAGISINKDINSMTLDDFDLQRAIVRGSWYLTKRILRLFMLRKNSGRIINISSVVGHTGNSGQIPYTMEKAA LDAFTKSLCKELAGRNILVNSVAPGFIDTPMTQNLPDEVKSRILGSIPLGRLGSPEEIADLVSFLACRASYISGTVIHVN GGLYGG >Mature_246_residues MNMSQDKPVAIITGGGTGIGAACSRILSRDGFRVGINYIDPVEEQSRQVLSELEDGFLLKADLSNPDEIETMIAEIREKA RRVDVLVNGAGISINKDINSMTLDDFDLQRAIVRGSWYLTKRILRLFMLRKNSGRIINISSVVGHTGNSGQIPYTMEKAA LDAFTKSLCKELAGRNILVNSVAPGFIDTPMTQNLPDEVKSRILGSIPLGRLGSPEEIADLVSFLACRASYISGTVIHVN GGLYGG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=35.4838709677419, Blast_Score=138, Evalue=5e-33, Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=35.5371900826446, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=32.5991189427313, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=30.952380952381, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI4758504, Length=252, Percent_Identity=29.7619047619048, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI32483357, Length=243, Percent_Identity=30.4526748971193, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI66933014, Length=189, Percent_Identity=30.6878306878307, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI4503301, Length=189, Percent_Identity=25.3968253968254, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI83715985, Length=252, Percent_Identity=28.1746031746032, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI7705925, Length=240, Percent_Identity=26.25, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI4504505, Length=256, Percent_Identity=28.125, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI109715829, Length=234, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI19923817, Length=251, Percent_Identity=28.6852589641434, Blast_Score=71, Evalue=9e-13, Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=29.2307692307692, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=28.6885245901639, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI126723750, Length=118, Percent_Identity=36.4406779661017, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=39.8373983739837, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI87082100, Length=245, Percent_Identity=33.469387755102, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1788459, Length=240, Percent_Identity=35.8333333333333, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=31.7073170731707, Blast_Score=110, Evalue=7e-26, Organism=Escherichia coli, GI1790717, Length=240, Percent_Identity=28.3333333333333, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI87082160, Length=239, Percent_Identity=30.5439330543933, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=28.740157480315, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1786812, Length=243, Percent_Identity=29.6296296296296, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=30.5220883534137, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=28.3400809716599, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI2367365, Length=239, Percent_Identity=28.0334728033473, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787820, Length=237, Percent_Identity=23.6286919831224, Blast_Score=64, Evalue=8e-12, Organism=Caenorhabditis elegans, GI25147288, Length=241, Percent_Identity=35.2697095435685, Blast_Score=139, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17555706, Length=239, Percent_Identity=34.7280334728033, Blast_Score=133, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17538182, Length=248, Percent_Identity=30.241935483871, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=29.0697674418605, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=30.859375, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193204405, Length=258, Percent_Identity=32.5581395348837, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=29.4354838709677, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17560150, Length=253, Percent_Identity=32.0158102766798, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=32.0610687022901, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17551412, Length=260, Percent_Identity=31.1538461538462, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17560676, Length=244, Percent_Identity=31.9672131147541, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=29.4820717131474, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17562908, Length=256, Percent_Identity=29.6875, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562990, Length=253, Percent_Identity=31.6205533596838, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538480, Length=258, Percent_Identity=32.5581395348837, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17560332, Length=272, Percent_Identity=31.6176470588235, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=32.5670498084291, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17568967, Length=260, Percent_Identity=28.4615384615385, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=30.5970149253731, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=28.6792452830189, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115534694, Length=163, Percent_Identity=35.5828220858896, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=29.0697674418605, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=28.0155642023346, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536025, Length=246, Percent_Identity=24.7967479674797, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=30.6513409961686, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=28.030303030303, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=28.2868525896414, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=24.8995983935743, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17561272, Length=192, Percent_Identity=25, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17544670, Length=260, Percent_Identity=26.1538461538462, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17564282, Length=186, Percent_Identity=29.5698924731183, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193203117, Length=237, Percent_Identity=27.8481012658228, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193203115, Length=239, Percent_Identity=27.6150627615063, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=26.4822134387352, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=31.0483870967742, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322861, Length=258, Percent_Identity=30.6201550387597, Blast_Score=82, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323882, Length=246, Percent_Identity=25.609756097561, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=36.5145228215768, Blast_Score=149, Evalue=2e-36, Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=33.9920948616601, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI28571526, Length=256, Percent_Identity=33.59375, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=32.6693227091633, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=32.5301204819277, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24644337, Length=193, Percent_Identity=36.2694300518135, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=29.2490118577075, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=29.2, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=32.4742268041237, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI28571387, Length=216, Percent_Identity=31.9444444444444, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24586328, Length=203, Percent_Identity=26.1083743842365, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI18859837, Length=249, Percent_Identity=25.7028112449799, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24641232, Length=214, Percent_Identity=30.8411214953271, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640442, Length=207, Percent_Identity=30.9178743961353, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355631, Length=167, Percent_Identity=26.9461077844311, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26656; Mature: 26656
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMSQDKPVAIITGGGTGIGAACSRILSRDGFRVGINYIDPVEEQSRQVLSELEDGFLLK CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEE ADLSNPDEIETMIAEIREKARRVDVLVNGAGISINKDINSMTLDDFDLQRAIVRGSWYLT ECCCCHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHCHHHHH KRILRLFMLRKNSGRIINISSVVGHTGNSGQIPYTMEKAALDAFTKSLCKELAGRNILVN HHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE SVAPGFIDTPMTQNLPDEVKSRILGSIPLGRLGSPEEIADLVSFLACRASYISGTVIHVN CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC GGLYGG CCCCCC >Mature Secondary Structure MNMSQDKPVAIITGGGTGIGAACSRILSRDGFRVGINYIDPVEEQSRQVLSELEDGFLLK CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEE ADLSNPDEIETMIAEIREKARRVDVLVNGAGISINKDINSMTLDDFDLQRAIVRGSWYLT ECCCCHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHCHHHHH KRILRLFMLRKNSGRIINISSVVGHTGNSGQIPYTMEKAALDAFTKSLCKELAGRNILVN HHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE SVAPGFIDTPMTQNLPDEVKSRILGSIPLGRLGSPEEIADLVSFLACRASYISGTVIHVN CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC GGLYGG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]