| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860803
Identifier: 85860803
GI number: 85860803
Start: 2970016
End: 2970444
Strand: Direct
Name: 85860803
Synonym: SYN_00314
Alternate gene names: NA
Gene position: 2970016-2970444 (Clockwise)
Preceding gene: 85860802
Following gene: 85860811
Centisome position: 93.42
GC content: 53.15
Gene sequence:
>429_bases GTGACGGTCATGTTCAAGCATATTCTTGTCCCTGTCGACTTTTCACCTAAAAACAGGCACGCACTGGACATTGCCCTGAA AATTGCCGAGTCGGACAAGTCCCGCATCAGTCTGCTCCACGTTGTGGAGATCATCGCTGACACGACCTTTGAAGAATATC GGGAATTTTATGCCGGCCTCGAAAAGAGGGCGCAAAAAAAAATGGCCAGCCTGACCGCCTTCTGCGAAGCTCAGGGCGTT CCGGCGGCAGACCGGATCGCCTTCGGCAACAGGGTGCAGGAAATCCTGAGTCACGCCGCTGAAACAGGGGTGGATCTGAT TGTCATGAGCTCTCACAAGCTGCAGATTGAAGAACCGCCTCAGGATTGGGGAACCATCAGCTATAAAGTGGGCATCCTCT CTCAGTGTCCGGTCCTGCTGGTGAAATAA
Upstream 100 bases:
>100_bases CCCCTTTCGGAATTCGTTGATCTTTCTTTAAAGGCCATGCAGGAGATCAGCGGGCACCTGGGGTTGTGATTCCCGGAAAT CTATAATCTATATCTCGGAG
Downstream 100 bases:
>100_bases GCATTTCCGTCAATGCTCCCCGCCAGTCCCCGGCGATCAGATCCGCATGACGCCGCTGCGGCAGCTCCGTCGTCAAGGGC GCCTTTTCGAATCAGCTGGA
Product: universal stress protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein A; Universal Stress Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTVMFKHILVPVDFSPKNRHALDIALKIAESDKSRISLLHVVEIIADTTFEEYREFYAGLEKRAQKKMASLTAFCEAQGV PAADRIAFGNRVQEILSHAAETGVDLIVMSSHKLQIEEPPQDWGTISYKVGILSQCPVLLVK
Sequences:
>Translated_142_residues MTVMFKHILVPVDFSPKNRHALDIALKIAESDKSRISLLHVVEIIADTTFEEYREFYAGLEKRAQKKMASLTAFCEAQGV PAADRIAFGNRVQEILSHAAETGVDLIVMSSHKLQIEEPPQDWGTISYKVGILSQCPVLLVK >Mature_141_residues TVMFKHILVPVDFSPKNRHALDIALKIAESDKSRISLLHVVEIIADTTFEEYREFYAGLEKRAQKKMASLTAFCEAQGVP AADRIAFGNRVQEILSHAAETGVDLIVMSSHKLQIEEPPQDWGTISYKVGILSQCPVLLVK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15852; Mature: 15720
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVMFKHILVPVDFSPKNRHALDIALKIAESDKSRISLLHVVEIIADTTFEEYREFYAGL CEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH EKRAQKKMASLTAFCEAQGVPAADRIAFGNRVQEILSHAAETGVDLIVMSSHKLQIEEPP HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCC QDWGTISYKVGILSQCPVLLVK CCCCEEEEEECCCCCCCEEEEC >Mature Secondary Structure TVMFKHILVPVDFSPKNRHALDIALKIAESDKSRISLLHVVEIIADTTFEEYREFYAGL EEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH EKRAQKKMASLTAFCEAQGVPAADRIAFGNRVQEILSHAAETGVDLIVMSSHKLQIEEPP HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCC QDWGTISYKVGILSQCPVLLVK CCCCEEEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA