| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860788
Identifier: 85860788
GI number: 85860788
Start: 2956239
End: 2956688
Strand: Direct
Name: 85860788
Synonym: SYN_00332
Alternate gene names: NA
Gene position: 2956239-2956688 (Clockwise)
Preceding gene: 85860787
Following gene: 85860789
Centisome position: 92.98
GC content: 50.0
Gene sequence:
>450_bases ATGACATGGGATAAAGTTTTAAAAGCCATCAATATTATTTTTCCTTTGATCGGAATGGGACTGATGATCTTCTATGATGC CTGCGACACGTCCTGCTCCTATCTTCAGGGCACATTACTGGGTATCGATCTGAAAATTGTAGGGATCCTCTTTATGGCCG GTCTTCTGGCAGCGGCTTTGCCTCCCTTTTCCCGCTACCCGATCCCCATCGACCATCTGCGCACCATGATGCTTTCCGCC GCCATTGGAGGGGAAATTCTACTGGTTCGTTTTCAGATCGCGGAGGGCACCTACTGCCCCTTCTGTCTGGCCTTCGGGAT GTGCCTTCTGGTCCTGTTTGCAGCAAATTTCATCATGATGAACAAGTATCTGGCGCTGGGCTCCTTCCTGGCTGGAATCG GCGCCTTTGTCCTTTTTTTTGAAGGTTCTGTTCTGCCTCTTTACGGGTAG
Upstream 100 bases:
>100_bases GAAGTTTTCAGCGGAGGGGAAGACATCGTCAACGCCCTCAGACACTTGCGATGAATGAGAAAGGAAATAAAAAAACGGCT CATAACCAAGGAATAAGGCA
Downstream 100 bases:
>100_bases GGCAGGTTCATCCCTGACGCACGTGTCGAAAAAAAAACAAAAATACAGTCCGTCTTCTCAAAACGACGCACGAGAACTGC TCAGGGAACAGGTTAAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTWDKVLKAINIIFPLIGMGLMIFYDACDTSCSYLQGTLLGIDLKIVGILFMAGLLAAALPPFSRYPIPIDHLRTMMLSA AIGGEILLVRFQIAEGTYCPFCLAFGMCLLVLFAANFIMMNKYLALGSFLAGIGAFVLFFEGSVLPLYG
Sequences:
>Translated_149_residues MTWDKVLKAINIIFPLIGMGLMIFYDACDTSCSYLQGTLLGIDLKIVGILFMAGLLAAALPPFSRYPIPIDHLRTMMLSA AIGGEILLVRFQIAEGTYCPFCLAFGMCLLVLFAANFIMMNKYLALGSFLAGIGAFVLFFEGSVLPLYG >Mature_148_residues TWDKVLKAINIIFPLIGMGLMIFYDACDTSCSYLQGTLLGIDLKIVGILFMAGLLAAALPPFSRYPIPIDHLRTMMLSAA IGGEILLVRFQIAEGTYCPFCLAFGMCLLVLFAANFIMMNKYLALGSFLAGIGAFVLFFEGSVLPLYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16224; Mature: 16093
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWDKVLKAINIIFPLIGMGLMIFYDACDTSCSYLQGTLLGIDLKIVGILFMAGLLAAAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPFSRYPIPIDHLRTMMLSAAIGGEILLVRFQIAEGTYCPFCLAFGMCLLVLFAANFIMM CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH NKYLALGSFLAGIGAFVLFFEGSVLPLYG HHHHHHHHHHHHHHHHHHHHCCCEECCCC >Mature Secondary Structure TWDKVLKAINIIFPLIGMGLMIFYDACDTSCSYLQGTLLGIDLKIVGILFMAGLLAAAL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PPFSRYPIPIDHLRTMMLSAAIGGEILLVRFQIAEGTYCPFCLAFGMCLLVLFAANFIMM CCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH NKYLALGSFLAGIGAFVLFFEGSVLPLYG HHHHHHHHHHHHHHHHHHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA