| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85860787
Identifier: 85860787
GI number: 85860787
Start: 2955614
End: 2956192
Strand: Direct
Name: 85860787
Synonym: SYN_00333
Alternate gene names: NA
Gene position: 2955614-2956192 (Clockwise)
Preceding gene: 85860785
Following gene: 85860788
Centisome position: 92.96
GC content: 49.05
Gene sequence:
>579_bases ATGAAATTTAATTCCATTGCCACAAAAGCCTTGCTTTTCATTGTGCTGTCGTTGTTTGTTTTTCTCAGAAGCAACGCGCC GGGACAGGAACAAATCTTCCCGGCTTACGGAGTCGGGAAGATTGAGGTGCGTCTTTACACGGACTATTTCTGCCCGCCCT GCCGGAATATGGAACCGGCGGTGGAGCCGATCCTGAAAGATCTGATCAAAAATAACGTTATCCGGCTGACTCTGGTGGAT GTTCCCTTAAGCCGCCAGAGCATTCTGTACACCCGGTATTTTCTCTATGCCCTGAAGAGTAAAAATGATCCGGAACATGC CATCAAGATCAGGAAGATACTGTTCGAGACCGCCGAAGCCGGCAGCGTCACAACACAGGAGCAGATTGAAAAGCATTTGA AAAGCAAGGAGATACCATTTCATCCCTTTGACCTGAAATCCGCCTTCGACCGCTTCAACGTCCTGATCCGGGAAGATCAC ATCAATGCAACACCGACCTGCGTCATCATAAAAAGCGGTAAGAAGGAAGTTTTCAGCGGAGGGGAAGACATCGTCAACGC CCTCAGACACTTGCGATGA
Upstream 100 bases:
>100_bases TGCACCCCGTGAATCTCCTTGGAAAAAGGATAGAGCAACCCCTTTAATCGATCGGAAATAATTTCCAGAAATCATATGGA AAATCAAAGGGTTAAATTAC
Downstream 100 bases:
>100_bases ATGAGAAAGGAAATAAAAAAACGGCTCATAACCAAGGAATAAGGCAATGACATGGGATAAAGTTTTAAAAGCCATCAATA TTATTTTTCCTTTGATCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPAVEPILKDLIKNNVIRLTLVD VPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEAGSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDH INATPTCVIIKSGKKEVFSGGEDIVNALRHLR
Sequences:
>Translated_192_residues MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPAVEPILKDLIKNNVIRLTLVD VPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEAGSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDH INATPTCVIIKSGKKEVFSGGEDIVNALRHLR >Mature_192_residues MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPAVEPILKDLIKNNVIRLTLVD VPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEAGSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDH INATPTCVIIKSGKKEVFSGGEDIVNALRHLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21981; Mature: 21981
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH VEPILKDLIKNNVIRLTLVDVPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEA HHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC GSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDHINATPTCVIIKSGKKEVFSG CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHCC GEDIVNALRHLR CHHHHHHHHHCC >Mature Secondary Structure MKFNSIATKALLFIVLSLFVFLRSNAPGQEQIFPAYGVGKIEVRLYTDYFCPPCRNMEPA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH VEPILKDLIKNNVIRLTLVDVPLSRQSILYTRYFLYALKSKNDPEHAIKIRKILFETAEA HHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC GSVTTQEQIEKHLKSKEIPFHPFDLKSAFDRFNVLIREDHINATPTCVIIKSGKKEVFSG CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEECCCCCCCEEEEEECCCHHHHCC GEDIVNALRHLR CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA