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The map label for this gene is ybhR [H]

Identifier: 85860685

GI number: 85860685

Start: 2861146

End: 2862348

Strand: Direct

Name: ybhR [H]

Synonym: SYN_00244

Alternate gene names: 85860685

Gene position: 2861146-2862348 (Clockwise)

Preceding gene: 85860684

Following gene: 85860687

Centisome position: 89.99

GC content: 49.79

Gene sequence:

>1203_bases
GTGTTTTCGGGATTCTCGCCTTTGCGATGGCTAACAGAAAGTTCAAGAAAAAAATTATCTAAGCAATGTGAAACGCGGAA
GCAGGAGTGTCATGTGACTGAACGCATTCGACAGGTGGTAAGAAAGGAGTTTATAGAGCTTTTCCGTGACAAGCGGATGA
AGGGAATCGTTTTGCTACTTCCGATCATCCAACTTTTTGTTTTCGGCTATGCGGTGACCACCGACGTGAATCATGTTTTG
ACTGCAATTTACGATCGGGATGCTTCTCCCGACAGCAGGGAACTGGCAAGGCGGTTTGAAGGGTCGGGCTATTTCAATAT
TATTTACCGTGTCTCCTCTGGCAAGGAACTTCAGGAACTCGTTGACCGGGGAAAGGTGCTCTGTGCTATTGAAATAAGGG
AAGGATTCGCAAAGGACCTCGCCCGGGGTTTCCCCACGGCTATCCAGGTCATTGTGGATGGAACTGACTCAAATACGGCC
TCGGTAGCAGGCAGTTATGCCTCCAGGATTATCCTCCAGTATGGAAGGGAAAAAGGAAAGCACATCGAGGCGACCCCTGT
CAAACTCGATGTTAGGGCACGGGCCTGGTACAACCCGGATTTGAGGAGCAGGAACTATAATGTCCCCGGGGTTATCGCTA
TCTTGATCATGCTCATCTGCCTGCTGCTTACTTCCATGGCCATTGTGAGGGAGCGTGAAATCGGGACGATAGAGCAGCTC
ATGGTCACCCCGTTGCGTCCTTTCGAGCTGATGATGGGCAAAACCGTCCCCTTCGCACTGATCGGGTTTTTTGACATGCT
CCTTGTGACGACAGTGGGCACTACCTGGTTCAACATCCCAATCAAAGGTTCACTGCCCCTTCTCTTTCTGGGTACCGCCA
TCTATCTTATCTCAGTCCTTGGAATCGGGCTTTTTATCTCGACGATTTCCAGAACGCAACAGCAAGCCCTCATGGCCACC
TTCCTTTTTTTTGCGCCTGCTATTCTCCTATCGGGATTCATGTTTCCAATCGAGAATATGCCAGTACCCGTACAGTACAT
CACCTACCTAAATCCGCTGCGGTACATCCTCGTGATCATTCGCGGCATCTTTCTTAAGGGCAACGGAATGGACGTTCTGT
GGCCGGAGATAACCGCGCTATCACTTCTCAGCCTGCTTCTGGTCGGGGTAAGTTCGCTGAGATTCAAGAAAAAAATTGGG
TAA

Upstream 100 bases:

>100_bases
ACCCGGATCATCCCAGCCAGGTACTTTGTCAGTCTCATCAAGGACATTTTTCTGAAGGCCAACCCCTTAAAATTTCTGGC
CTTCGATACACTCCTGTTGA

Downstream 100 bases:

>100_bases
AGGGAGGCGTTTATAGTTCATGGAGATCTCTTAAGGTTTTGAAGCATCACTTAGAAATATTTGCATGTTGCCTCAGTAAT
AAAAGTGTTGCCGATGCTTT

Product: export ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MFSGFSPLRWLTESSRKKLSKQCETRKQECHVTERIRQVVRKEFIELFRDKRMKGIVLLLPIIQLFVFGYAVTTDVNHVL
TAIYDRDASPDSRELARRFEGSGYFNIIYRVSSGKELQELVDRGKVLCAIEIREGFAKDLARGFPTAIQVIVDGTDSNTA
SVAGSYASRIILQYGREKGKHIEATPVKLDVRARAWYNPDLRSRNYNVPGVIAILIMLICLLLTSMAIVREREIGTIEQL
MVTPLRPFELMMGKTVPFALIGFFDMLLVTTVGTTWFNIPIKGSLPLLFLGTAIYLISVLGIGLFISTISRTQQQALMAT
FLFFAPAILLSGFMFPIENMPVPVQYITYLNPLRYILVIIRGIFLKGNGMDVLWPEITALSLLSLLLVGVSSLRFKKKIG

Sequences:

>Translated_400_residues
MFSGFSPLRWLTESSRKKLSKQCETRKQECHVTERIRQVVRKEFIELFRDKRMKGIVLLLPIIQLFVFGYAVTTDVNHVL
TAIYDRDASPDSRELARRFEGSGYFNIIYRVSSGKELQELVDRGKVLCAIEIREGFAKDLARGFPTAIQVIVDGTDSNTA
SVAGSYASRIILQYGREKGKHIEATPVKLDVRARAWYNPDLRSRNYNVPGVIAILIMLICLLLTSMAIVREREIGTIEQL
MVTPLRPFELMMGKTVPFALIGFFDMLLVTTVGTTWFNIPIKGSLPLLFLGTAIYLISVLGIGLFISTISRTQQQALMAT
FLFFAPAILLSGFMFPIENMPVPVQYITYLNPLRYILVIIRGIFLKGNGMDVLWPEITALSLLSLLLVGVSSLRFKKKIG
>Mature_400_residues
MFSGFSPLRWLTESSRKKLSKQCETRKQECHVTERIRQVVRKEFIELFRDKRMKGIVLLLPIIQLFVFGYAVTTDVNHVL
TAIYDRDASPDSRELARRFEGSGYFNIIYRVSSGKELQELVDRGKVLCAIEIREGFAKDLARGFPTAIQVIVDGTDSNTA
SVAGSYASRIILQYGREKGKHIEATPVKLDVRARAWYNPDLRSRNYNVPGVIAILIMLICLLLTSMAIVREREIGTIEQL
MVTPLRPFELMMGKTVPFALIGFFDMLLVTTVGTTWFNIPIKGSLPLLFLGTAIYLISVLGIGLFISTISRTQQQALMAT
FLFFAPAILLSGFMFPIENMPVPVQYITYLNPLRYILVIIRGIFLKGNGMDVLWPEITALSLLSLLLVGVSSLRFKKKIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=33.9673913043478, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1787011, Length=343, Percent_Identity=34.402332361516, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI48994943, Length=371, Percent_Identity=30.9973045822102, Blast_Score=178, Evalue=6e-46,
Organism=Escherichia coli, GI226510979, Length=369, Percent_Identity=29.810298102981, Blast_Score=142, Evalue=5e-35,
Organism=Drosophila melanogaster, GI24650855, Length=393, Percent_Identity=21.3740458015267, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24650853, Length=393, Percent_Identity=21.3740458015267, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI85725260, Length=405, Percent_Identity=20.4938271604938, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI85725262, Length=405, Percent_Identity=20.4938271604938, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 45116; Mature: 45116

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSGFSPLRWLTESSRKKLSKQCETRKQECHVTERIRQVVRKEFIELFRDKRMKGIVLLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
PIIQLFVFGYAVTTDVNHVLTAIYDRDASPDSRELARRFEGSGYFNIIYRVSSGKELQEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEEECCCHHHHHH
VDRGKVLCAIEIREGFAKDLARGFPTAIQVIVDGTDSNTASVAGSYASRIILQYGREKGK
HHCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
HIEATPVKLDVRARAWYNPDLRSRNYNVPGVIAILIMLICLLLTSMAIVREREIGTIEQL
EEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
MVTPLRPFELMMGKTVPFALIGFFDMLLVTTVGTTWFNIPIKGSLPLLFLGTAIYLISVL
HHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH
GIGLFISTISRTQQQALMATFLFFAPAILLSGFMFPIENMPVPVQYITYLNPLRYILVII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RGIFLKGNGMDVLWPEITALSLLSLLLVGVSSLRFKKKIG
HHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSGFSPLRWLTESSRKKLSKQCETRKQECHVTERIRQVVRKEFIELFRDKRMKGIVLLL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
PIIQLFVFGYAVTTDVNHVLTAIYDRDASPDSRELARRFEGSGYFNIIYRVSSGKELQEL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEEECCCHHHHHH
VDRGKVLCAIEIREGFAKDLARGFPTAIQVIVDGTDSNTASVAGSYASRIILQYGREKGK
HHCCCEEEEEEHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
HIEATPVKLDVRARAWYNPDLRSRNYNVPGVIAILIMLICLLLTSMAIVREREIGTIEQL
EEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
MVTPLRPFELMMGKTVPFALIGFFDMLLVTTVGTTWFNIPIKGSLPLLFLGTAIYLISVL
HHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH
GIGLFISTISRTQQQALMATFLFFAPAILLSGFMFPIENMPVPVQYITYLNPLRYILVII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RGIFLKGNGMDVLWPEITALSLLSLLLVGVSSLRFKKKIG
HHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]