| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is yodP [H]
Identifier: 85860657
GI number: 85860657
Start: 2829306
End: 2830169
Strand: Direct
Name: yodP [H]
Synonym: SYN_02633
Alternate gene names: 85860657
Gene position: 2829306-2830169 (Clockwise)
Preceding gene: 85860656
Following gene: 85860658
Centisome position: 88.99
GC content: 49.54
Gene sequence:
>864_bases ATGAACTCCTTCGTAAAAAATTCTCTGCCGGACCGGATAGAAAAGCTTCCCTGCGGCTCAGTCATCCAGCATGGTCCATA CAATGAGCGGATATACCTGCTGAAAGTGGGAGGCGACGCCACAGGGCTTCTCCCTTTCGTTCTGGTTGCAATGGCAAAGG GATACGGTTATTCGAAGATATTTGTCAAAGTTCCCACAGGCTTCTCAAAAAAGTTTTCCCGGGCGGGCTATGTCGAGGAG GCCTCCATCCCCGGATTGTACAACGGCTCAAATACAGGAACGTTCATGGGGTATTATCTGAAAGAGCAGCGTGCCTCCGA ACGGGAAGCGGCAACTCTGGATGCAATTCTTCATCTTGCAATCAGCAGATCCGAATCACCTGTGACGCCACTGGATGCAA AACGGTTCATAATCCGCAGCTGCACGGAAAGCGATATCGATCAAATGGCTGCCATCTATCGGACTGTTTTTCCCACCTAT CCGTTTCCGATTCATGACCCCGCGTATCTGCTCGATACGATGCGGAGCCACGTCGCTTATTTCGGTGTCGAATCGGACGG GAAACTGGTGGCGCTCTCTTCCGCTGAAATGGACAAGTCCGCTCAAAATGTAGAAATGACTGATTTTGCGACACTTCTTC AATGGCAGAGAAGCAGTCTGAGCCTGCATCTGCTTGCCCGCATGGAAAAAGAGATGAAGCAGGAAGGAATAAAAACGGCG TATACCATTGCCCGTGCCATGTCCCCGGGAATCAACGTTACATTTTCCAGACTCGGCTATGCCTATGGAGGAAGATTAAA AAACAACACCAATATTTCCGCGCAAATCGAGAGCATGAACGTCTGGTACAAAAAACTCTCTTAG
Upstream 100 bases:
>100_bases CGGGTGAATTCCGTGCCGTAGGCATAGAAAAACTGCTGGCCGACTACGACGACACCATTGCCCTGGTTCCCAGGAATAAC GATCGCCACAGGAGAAGAGG
Downstream 100 bases:
>100_bases TTTTTCAATTTATTCCGTTCCATTTAACTTCGATGCAGTCTGTGGAACCTTATCCCCGCCAGAAAGAGGAAGGTTTATGT ACGCAAAGGCATCTGAATTG
Product: beta-lysine acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNSFVKNSLPDRIEKLPCGSVIQHGPYNERIYLLKVGGDATGLLPFVLVAMAKGYGYSKIFVKVPTGFSKKFSRAGYVEE ASIPGLYNGSNTGTFMGYYLKEQRASEREAATLDAILHLAISRSESPVTPLDAKRFIIRSCTESDIDQMAAIYRTVFPTY PFPIHDPAYLLDTMRSHVAYFGVESDGKLVALSSAEMDKSAQNVEMTDFATLLQWQRSSLSLHLLARMEKEMKQEGIKTA YTIARAMSPGINVTFSRLGYAYGGRLKNNTNISAQIESMNVWYKKLS
Sequences:
>Translated_287_residues MNSFVKNSLPDRIEKLPCGSVIQHGPYNERIYLLKVGGDATGLLPFVLVAMAKGYGYSKIFVKVPTGFSKKFSRAGYVEE ASIPGLYNGSNTGTFMGYYLKEQRASEREAATLDAILHLAISRSESPVTPLDAKRFIIRSCTESDIDQMAAIYRTVFPTY PFPIHDPAYLLDTMRSHVAYFGVESDGKLVALSSAEMDKSAQNVEMTDFATLLQWQRSSLSLHLLARMEKEMKQEGIKTA YTIARAMSPGINVTFSRLGYAYGGRLKNNTNISAQIESMNVWYKKLS >Mature_287_residues MNSFVKNSLPDRIEKLPCGSVIQHGPYNERIYLLKVGGDATGLLPFVLVAMAKGYGYSKIFVKVPTGFSKKFSRAGYVEE ASIPGLYNGSNTGTFMGYYLKEQRASEREAATLDAILHLAISRSESPVTPLDAKRFIIRSCTESDIDQMAAIYRTVFPTY PFPIHDPAYLLDTMRSHVAYFGVESDGKLVALSSAEMDKSAQNVEMTDFATLLQWQRSSLSLHLLARMEKEMKQEGIKTA YTIARAMSPGINVTFSRLGYAYGGRLKNNTNISAQIESMNVWYKKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR022525 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 31966; Mature: 31966
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFVKNSLPDRIEKLPCGSVIQHGPYNERIYLLKVGGDATGLLPFVLVAMAKGYGYSKI CCCHHHCCCHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEE FVKVPTGFSKKFSRAGYVEEASIPGLYNGSNTGTFMGYYLKEQRASEREAATLDAILHLA EEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHH ISRSESPVTPLDAKRFIIRSCTESDIDQMAAIYRTVFPTYPFPIHDPAYLLDTMRSHVAY HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEE FGVESDGKLVALSSAEMDKSAQNVEMTDFATLLQWQRSSLSLHLLARMEKEMKQEGIKTA EEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHH YTIARAMSPGINVTFSRLGYAYGGRLKNNTNISAQIESMNVWYKKLS HHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHCC >Mature Secondary Structure MNSFVKNSLPDRIEKLPCGSVIQHGPYNERIYLLKVGGDATGLLPFVLVAMAKGYGYSKI CCCHHHCCCHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEE FVKVPTGFSKKFSRAGYVEEASIPGLYNGSNTGTFMGYYLKEQRASEREAATLDAILHLA EEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHH ISRSESPVTPLDAKRFIIRSCTESDIDQMAAIYRTVFPTYPFPIHDPAYLLDTMRSHVAY HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHEE FGVESDGKLVALSSAEMDKSAQNVEMTDFATLLQWQRSSLSLHLLARMEKEMKQEGIKTA EEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHH YTIARAMSPGINVTFSRLGYAYGGRLKNNTNISAQIESMNVWYKKLS HHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]